Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Gm6222-201ENSMUST00000120787 396 ntBASIC13.71□□□□□ -0.21
Pcdha8Q91Y12 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha8Q91Y12 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha8Q91Y12 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.71□□□□□ -0.21
Pcdha8Q91Y12 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha8Q91Y12 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.71□□□□□ -0.21
Pcdha8Q91Y12 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha8Q91Y12 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.71□□□□□ -0.21
Pcdha8Q91Y12 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.71□□□□□ -0.21
Pcdha8Q91Y12 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.71□□□□□ -0.21
Pcdha8Q91Y12 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.71□□□□□ -0.21
Pcdha8Q91Y12 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha8Q91Y12 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Pcdha8Q91Y12 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha8Q91Y12 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdha8Q91Y12 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdha8Q91Y12 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdha8Q91Y12 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdha8Q91Y12 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdha8Q91Y12 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdha8Q91Y12 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdha8Q91Y12 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdha8Q91Y12 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha8Q91Y12 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha8Q91Y12 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha8Q91Y12 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha8Q91Y12 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha8Q91Y12 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha8Q91Y12 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha8Q91Y12 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Pcdha8Q91Y12 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha8Q91Y12 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha8Q91Y12 Gm10253-201ENSMUST00000194270 940 ntBASIC13.7□□□□□ -0.22
Pcdha8Q91Y12 Gm5312-201ENSMUST00000203728 547 ntBASIC13.7□□□□□ -0.22
Pcdha8Q91Y12 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha8Q91Y12 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Pcdha8Q91Y12 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha8Q91Y12 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha8Q91Y12 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha8Q91Y12 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha8Q91Y12 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha8Q91Y12 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha8Q91Y12 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha8Q91Y12 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha8Q91Y12 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.7□□□□□ -0.22
Pcdha8Q91Y12 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha8Q91Y12 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha8Q91Y12 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdha8Q91Y12 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Gm23935-201ENSMUST00000102303 57 ntBASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Gm24270-201ENSMUST00000102326 57 ntBASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Gm13823-201ENSMUST00000119930 345 ntBASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Gm24245-201ENSMUST00000157318 57 ntBASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Gm26308-201ENSMUST00000157768 69 ntBASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Gm43575-201ENSMUST00000196420 516 ntBASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.69□□□□□ -0.22
Pcdha8Q91Y12 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Pcdha8Q91Y12 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha8Q91Y12 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha8Q91Y12 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha8Q91Y12 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha8Q91Y12 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha8Q91Y12 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.68□□□□□ -0.22
Pcdha8Q91Y12 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha8Q91Y12 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha8Q91Y12 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha8Q91Y12 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha8Q91Y12 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha8Q91Y12 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha8Q91Y12 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms