Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm29741-201ENSMUST00000192667 421 ntBASIC14.94□□□□□ -0.02
Pcdha9Q91Y11 Gm10766-202ENSMUST00000194123 606 ntBASIC14.94□□□□□ -0.02
Pcdha9Q91Y11 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha9Q91Y11 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha9Q91Y11 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Pcdha9Q91Y11 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Pcdha9Q91Y11 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Pcdha9Q91Y11 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.94□□□□□ -0.02
Pcdha9Q91Y11 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Pcdha9Q91Y11 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha9Q91Y11 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha9Q91Y11 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha9Q91Y11 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha9Q91Y11 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha9Q91Y11 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Pcdha9Q91Y11 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha9Q91Y11 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha9Q91Y11 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha9Q91Y11 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha9Q91Y11 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha9Q91Y11 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Pcdha9Q91Y11 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha9Q91Y11 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha9Q91Y11 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha9Q91Y11 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.93□□□□□ -0.02
Pcdha9Q91Y11 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha9Q91Y11 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Pcdha9Q91Y11 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.93□□□□□ -0.02
Pcdha9Q91Y11 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha9Q91Y11 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.93□□□□□ -0.02
Pcdha9Q91Y11 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha9Q91Y11 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha9Q91Y11 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha9Q91Y11 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha9Q91Y11 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.93□□□□□ -0.02
Pcdha9Q91Y11 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha9Q91Y11 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha9Q91Y11 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha9Q91Y11 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha9Q91Y11 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha9Q91Y11 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha9Q91Y11 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 Gm12151-201ENSMUST00000121374 290 ntBASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 Gm5425-201ENSMUST00000214125 459 ntBASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha9Q91Y11 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Pcdha9Q91Y11 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha9Q91Y11 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdha9Q91Y11 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha9Q91Y11 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdha9Q91Y11 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Pcdha9Q91Y11 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha9Q91Y11 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha9Q91Y11 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Pcdha9Q91Y11 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha9Q91Y11 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha9Q91Y11 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha9Q91Y11 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha9Q91Y11 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.91□□□□□ -0.02
Pcdha9Q91Y11 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.91□□□□□ -0.02
Pcdha9Q91Y11 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Pcdha9Q91Y11 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdha9Q91Y11 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Pcdha9Q91Y11 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha9Q91Y11 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha9Q91Y11 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdha9Q91Y11 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms