Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb18Q91Y02 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Pcdhb18Q91Y02 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb18Q91Y02 Gm15957-201ENSMUST00000118893 974 ntBASIC14.7□□□□□ -0.06
Pcdhb18Q91Y02 Gm4804-201ENSMUST00000182234 999 ntBASIC14.7□□□□□ -0.06
Pcdhb18Q91Y02 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.7□□□□□ -0.06
Pcdhb18Q91Y02 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb18Q91Y02 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb18Q91Y02 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Pcdhb18Q91Y02 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.7□□□□□ -0.06
Pcdhb18Q91Y02 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb18Q91Y02 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb18Q91Y02 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Pcdhb18Q91Y02 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb18Q91Y02 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb18Q91Y02 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb18Q91Y02 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Pcdhb18Q91Y02 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb18Q91Y02 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Pcdhb18Q91Y02 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhb18Q91Y02 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Pcdhb18Q91Y02 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdhb18Q91Y02 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Gm13829-201ENSMUST00000119600 138 ntBASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Gm9002-201ENSMUST00000178437 499 ntBASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhb18Q91Y02 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Pcdhb18Q91Y02 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb18Q91Y02 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb18Q91Y02 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.68□□□□□ -0.06
Pcdhb18Q91Y02 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhb18Q91Y02 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb18Q91Y02 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdhb18Q91Y02 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb18Q91Y02 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.68□□□□□ -0.06
Pcdhb18Q91Y02 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.68□□□□□ -0.06
Pcdhb18Q91Y02 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb18Q91Y02 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.68□□□□□ -0.06
Pcdhb18Q91Y02 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.68□□□□□ -0.06
Pcdhb18Q91Y02 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdhb18Q91Y02 Gm18062-201ENSMUST00000208020 547 ntBASIC14.68□□□□□ -0.06
Pcdhb18Q91Y02 Gm18055-201ENSMUST00000208254 547 ntBASIC14.68□□□□□ -0.06
Pcdhb18Q91Y02 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.68□□□□□ -0.06
Pcdhb18Q91Y02 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb18Q91Y02 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Pcdhb18Q91Y02 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb18Q91Y02 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb18Q91Y02 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb18Q91Y02 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb18Q91Y02 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb18Q91Y02 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb18Q91Y02 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhb18Q91Y02 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.67□□□□□ -0.06
Pcdhb18Q91Y02 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.67□□□□□ -0.06
Pcdhb18Q91Y02 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb18Q91Y02 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb18Q91Y02 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb18Q91Y02 Gm12341-201ENSMUST00000119724 503 ntBASIC14.67□□□□□ -0.06
Pcdhb18Q91Y02 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.67□□□□□ -0.06
Pcdhb18Q91Y02 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdhb18Q91Y02 Gm17795-201ENSMUST00000214505 757 ntBASIC14.67□□□□□ -0.06
Pcdhb18Q91Y02 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb18Q91Y02 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms