Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb20Q91XZ9 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Gm13453-201ENSMUST00000118708 357 ntBASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Gm6222-201ENSMUST00000120787 396 ntBASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Samd13-204ENSMUST00000147113 729 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Mir7023-201ENSMUST00000185093 64 ntBASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Gm17837-201ENSMUST00000186435 985 ntBASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Gm37355-201ENSMUST00000193345 606 ntBASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 AC122924.1-201ENSMUST00000222044 163 ntBASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb20Q91XZ9 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Gm24543-201ENSMUST00000103867 82 ntBASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Gm22693-201ENSMUST00000175049 442 ntBASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Gm5717-201ENSMUST00000198243 1062 ntBASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Gm45210-201ENSMUST00000206401 1577 ntBASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb20Q91XZ9 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb20Q91XZ9 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms