Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb22Q91XZ8 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb22Q91XZ8 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb22Q91XZ8 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Pcdhb22Q91XZ8 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb22Q91XZ8 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pcdhb22Q91XZ8 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb22Q91XZ8 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Pcdhb22Q91XZ8 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb22Q91XZ8 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb22Q91XZ8 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
Pcdhb22Q91XZ8 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Pcdhb22Q91XZ8 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Pcdhb22Q91XZ8 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb22Q91XZ8 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb22Q91XZ8 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb22Q91XZ8 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb22Q91XZ8 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb22Q91XZ8 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb22Q91XZ8 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb22Q91XZ8 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.39■□□□□ 0.21
Pcdhb22Q91XZ8 Gm2445-201ENSMUST00000182798 989 ntBASIC16.39■□□□□ 0.21
Pcdhb22Q91XZ8 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Pcdhb22Q91XZ8 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb22Q91XZ8 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.39■□□□□ 0.21
Pcdhb22Q91XZ8 Gm5425-201ENSMUST00000214125 459 ntBASIC16.39■□□□□ 0.21
Pcdhb22Q91XZ8 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb22Q91XZ8 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.39■□□□□ 0.21
Pcdhb22Q91XZ8 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb22Q91XZ8 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb22Q91XZ8 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb22Q91XZ8 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb22Q91XZ8 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb22Q91XZ8 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb22Q91XZ8 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb22Q91XZ8 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb22Q91XZ8 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb22Q91XZ8 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb22Q91XZ8 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhb22Q91XZ8 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC16.38■□□□□ 0.21
Pcdhb22Q91XZ8 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb22Q91XZ8 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb22Q91XZ8 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb22Q91XZ8 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb22Q91XZ8 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb22Q91XZ8 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb22Q91XZ8 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb22Q91XZ8 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhb22Q91XZ8 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb22Q91XZ8 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb22Q91XZ8 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb22Q91XZ8 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb22Q91XZ8 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhb22Q91XZ8 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb22Q91XZ8 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.38■□□□□ 0.21
Pcdhb22Q91XZ8 Mir497b-201ENSMUST00000093601 125 ntBASIC16.38■□□□□ 0.21
Pcdhb22Q91XZ8 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhb22Q91XZ8 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhb22Q91XZ8 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb22Q91XZ8 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb22Q91XZ8 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb22Q91XZ8 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb22Q91XZ8 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb22Q91XZ8 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb22Q91XZ8 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.37■□□□□ 0.21
Pcdhb22Q91XZ8 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhb22Q91XZ8 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb22Q91XZ8 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb22Q91XZ8 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb22Q91XZ8 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhb22Q91XZ8 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16.37■□□□□ 0.21
Pcdhb22Q91XZ8 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb22Q91XZ8 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb22Q91XZ8 Gm14719-201ENSMUST00000121891 340 ntBASIC16.37■□□□□ 0.21
Pcdhb22Q91XZ8 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Pcdhb22Q91XZ8 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.37■□□□□ 0.21
Pcdhb22Q91XZ8 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb22Q91XZ8 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb22Q91XZ8 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.37■□□□□ 0.21
Pcdhb22Q91XZ8 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.37■□□□□ 0.21
Pcdhb22Q91XZ8 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhb22Q91XZ8 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb22Q91XZ8 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.37■□□□□ 0.21
Pcdhb22Q91XZ8 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb22Q91XZ8 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb22Q91XZ8 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.37■□□□□ 0.21
Pcdhb22Q91XZ8 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb22Q91XZ8 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.37■□□□□ 0.21
Pcdhb22Q91XZ8 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb22Q91XZ8 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb22Q91XZ8 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhb22Q91XZ8 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb22Q91XZ8 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb22Q91XZ8 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb22Q91XZ8 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb22Q91XZ8 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb22Q91XZ8 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb22Q91XZ8 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
Pcdhb22Q91XZ8 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.36■□□□□ 0.21
Pcdhb22Q91XZ8 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms