Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Gm14701-201ENSMUST00000117156 348 ntBASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Rprl2-201ENSMUST00000157150 290 ntBASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Gm8584-201ENSMUST00000171982 758 ntBASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga11Q91XY8 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhga11Q91XY8 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhga11Q91XY8 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhga11Q91XY8 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhga11Q91XY8 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhga11Q91XY8 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.58□□□□□ -0.24
Pcdhga11Q91XY8 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhga11Q91XY8 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Pcdhga11Q91XY8 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhga11Q91XY8 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhga11Q91XY8 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhga11Q91XY8 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.58□□□□□ -0.24
Pcdhga11Q91XY8 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Pcdhga11Q91XY8 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.58□□□□□ -0.24
Pcdhga11Q91XY8 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.58□□□□□ -0.24
Pcdhga11Q91XY8 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhga11Q91XY8 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhga11Q91XY8 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhga11Q91XY8 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhga11Q91XY8 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Pcdhga11Q91XY8 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.58□□□□□ -0.24
Pcdhga11Q91XY8 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhga11Q91XY8 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms