Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx41Q91VN6 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx41Q91VN6 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx41Q91VN6 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx41Q91VN6 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx41Q91VN6 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx41Q91VN6 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx41Q91VN6 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.14■□□□□ 0.17
Ddx41Q91VN6 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx41Q91VN6 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx41Q91VN6 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx41Q91VN6 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx41Q91VN6 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx41Q91VN6 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.14■□□□□ 0.17
Ddx41Q91VN6 Gm29667-201ENSMUST00000190817 490 ntBASIC16.14■□□□□ 0.17
Ddx41Q91VN6 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx41Q91VN6 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx41Q91VN6 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx41Q91VN6 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx41Q91VN6 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx41Q91VN6 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx41Q91VN6 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.14■□□□□ 0.17
Ddx41Q91VN6 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx41Q91VN6 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx41Q91VN6 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx41Q91VN6 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.14■□□□□ 0.17
Ddx41Q91VN6 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx41Q91VN6 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.14■□□□□ 0.17
Ddx41Q91VN6 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx41Q91VN6 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx41Q91VN6 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ddx41Q91VN6 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ddx41Q91VN6 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx41Q91VN6 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx41Q91VN6 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx41Q91VN6 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx41Q91VN6 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Ddx41Q91VN6 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx41Q91VN6 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx41Q91VN6 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx41Q91VN6 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx41Q91VN6 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx41Q91VN6 Gm4875-201ENSMUST00000118257 786 ntBASIC16.13■□□□□ 0.17
Ddx41Q91VN6 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx41Q91VN6 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx41Q91VN6 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx41Q91VN6 Gm24694-201ENSMUST00000180054 110 ntBASIC16.13■□□□□ 0.17
Ddx41Q91VN6 Gm27663-201ENSMUST00000184839 110 ntBASIC16.13■□□□□ 0.17
Ddx41Q91VN6 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx41Q91VN6 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx41Q91VN6 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.13■□□□□ 0.17
Ddx41Q91VN6 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx41Q91VN6 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Ddx41Q91VN6 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx41Q91VN6 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx41Q91VN6 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Ddx41Q91VN6 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ddx41Q91VN6 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Ddx41Q91VN6 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx41Q91VN6 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx41Q91VN6 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx41Q91VN6 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx41Q91VN6 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx41Q91VN6 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ddx41Q91VN6 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Ddx41Q91VN6 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx41Q91VN6 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx41Q91VN6 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Ddx41Q91VN6 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx41Q91VN6 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx41Q91VN6 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx41Q91VN6 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx41Q91VN6 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx41Q91VN6 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx41Q91VN6 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Ddx41Q91VN6 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC16.12■□□□□ 0.17
Ddx41Q91VN6 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx41Q91VN6 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ddx41Q91VN6 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx41Q91VN6 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx41Q91VN6 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx41Q91VN6 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ddx41Q91VN6 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC16.12■□□□□ 0.17
Ddx41Q91VN6 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ddx41Q91VN6 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ddx41Q91VN6 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx41Q91VN6 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx41Q91VN6 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.12■□□□□ 0.17
Ddx41Q91VN6 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ddx41Q91VN6 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ddx41Q91VN6 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx41Q91VN6 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx41Q91VN6 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx41Q91VN6 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ddx41Q91VN6 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx41Q91VN6 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx41Q91VN6 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ddx41Q91VN6 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
Ddx41Q91VN6 Gtpbp10-211ENSMUST00000198799 648 ntBASIC16.11■□□□□ 0.17
Ddx41Q91VN6 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms