Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Spcs1-207ENSMUST00000228767 1008 ntBASIC12.09□□□□□ -0.47
Tram1Q91V04 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.09□□□□□ -0.47
Tram1Q91V04 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tram1Q91V04 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.08□□□□□ -0.47
Tram1Q91V04 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Tram1Q91V04 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Tram1Q91V04 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Tram1Q91V04 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tram1Q91V04 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tram1Q91V04 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tram1Q91V04 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tram1Q91V04 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tram1Q91V04 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tram1Q91V04 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tram1Q91V04 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tram1Q91V04 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tram1Q91V04 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.08□□□□□ -0.48
Tram1Q91V04 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tram1Q91V04 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.08□□□□□ -0.48
Tram1Q91V04 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tram1Q91V04 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tram1Q91V04 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tram1Q91V04 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tram1Q91V04 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.08□□□□□ -0.48
Tram1Q91V04 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tram1Q91V04 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tram1Q91V04 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.08□□□□□ -0.48
Tram1Q91V04 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tram1Q91V04 Gm37230-201ENSMUST00000194491 818 ntBASIC12.08□□□□□ -0.48
Tram1Q91V04 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.08□□□□□ -0.48
Tram1Q91V04 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.08□□□□□ -0.48
Tram1Q91V04 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tram1Q91V04 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tram1Q91V04 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tram1Q91V04 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Tram1Q91V04 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tram1Q91V04 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.08□□□□□ -0.48
Tram1Q91V04 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tram1Q91V04 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tram1Q91V04 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.08□□□□□ -0.48
Tram1Q91V04 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Tram1Q91V04 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tram1Q91V04 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tram1Q91V04 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Tram1Q91V04 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Tram1Q91V04 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tram1Q91V04 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tram1Q91V04 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tram1Q91V04 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tram1Q91V04 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tram1Q91V04 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tram1Q91V04 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Tram1Q91V04 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tram1Q91V04 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tram1Q91V04 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tram1Q91V04 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tram1Q91V04 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tram1Q91V04 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tram1Q91V04 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tram1Q91V04 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Tram1Q91V04 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Tram1Q91V04 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.07□□□□□ -0.48
Tram1Q91V04 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Tram1Q91V04 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tram1Q91V04 Gm13418-201ENSMUST00000119097 944 ntBASIC12.07□□□□□ -0.48
Tram1Q91V04 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.07□□□□□ -0.48
Tram1Q91V04 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tram1Q91V04 Gm10275-202ENSMUST00000168697 495 ntBASIC12.07□□□□□ -0.48
Tram1Q91V04 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Tram1Q91V04 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.07□□□□□ -0.48
Tram1Q91V04 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.07□□□□□ -0.48
Tram1Q91V04 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tram1Q91V04 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tram1Q91V04 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.07□□□□□ -0.48
Tram1Q91V04 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tram1Q91V04 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tram1Q91V04 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tram1Q91V04 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tram1Q91V04 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.07□□□□□ -0.48
Tram1Q91V04 Gm10275-201ENSMUST00000092620 635 ntBASIC12.07□□□□□ -0.48
Tram1Q91V04 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tram1Q91V04 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tram1Q91V04 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tram1Q91V04 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms