Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
StrcQ8VIM6 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
StrcQ8VIM6 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC16.33■□□□□ 0.2
StrcQ8VIM6 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
StrcQ8VIM6 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
StrcQ8VIM6 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
StrcQ8VIM6 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
StrcQ8VIM6 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
StrcQ8VIM6 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
StrcQ8VIM6 Gm10434-201ENSMUST00000101158 471 ntBASIC16.33■□□□□ 0.2
StrcQ8VIM6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
StrcQ8VIM6 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
StrcQ8VIM6 Gm14277-201ENSMUST00000121195 360 ntBASIC16.33■□□□□ 0.2
StrcQ8VIM6 Gm24514-201ENSMUST00000174961 285 ntBASIC16.33■□□□□ 0.2
StrcQ8VIM6 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC16.33■□□□□ 0.2
StrcQ8VIM6 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC16.33■□□□□ 0.2
StrcQ8VIM6 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
StrcQ8VIM6 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
StrcQ8VIM6 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
StrcQ8VIM6 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
StrcQ8VIM6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
StrcQ8VIM6 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
StrcQ8VIM6 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
StrcQ8VIM6 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
StrcQ8VIM6 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
StrcQ8VIM6 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
StrcQ8VIM6 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
StrcQ8VIM6 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
StrcQ8VIM6 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
StrcQ8VIM6 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
StrcQ8VIM6 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
StrcQ8VIM6 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
StrcQ8VIM6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
StrcQ8VIM6 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC16.32■□□□□ 0.2
StrcQ8VIM6 AC173210.1-201ENSMUST00000222341 1131 ntBASIC16.32■□□□□ 0.2
StrcQ8VIM6 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
StrcQ8VIM6 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
StrcQ8VIM6 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
StrcQ8VIM6 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
StrcQ8VIM6 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.32■□□□□ 0.2
StrcQ8VIM6 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
StrcQ8VIM6 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
StrcQ8VIM6 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
StrcQ8VIM6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
StrcQ8VIM6 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.32■□□□□ 0.2
StrcQ8VIM6 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
StrcQ8VIM6 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
StrcQ8VIM6 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
StrcQ8VIM6 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.31■□□□□ 0.2
StrcQ8VIM6 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
StrcQ8VIM6 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
StrcQ8VIM6 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
StrcQ8VIM6 Gm14726-201ENSMUST00000120623 896 ntBASIC16.31■□□□□ 0.2
StrcQ8VIM6 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC16.31■□□□□ 0.2
StrcQ8VIM6 Mir7032-201ENSMUST00000185154 79 ntBASIC16.31■□□□□ 0.2
StrcQ8VIM6 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC16.31■□□□□ 0.2
StrcQ8VIM6 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
StrcQ8VIM6 Gm8959-201ENSMUST00000213150 571 ntBASIC16.31■□□□□ 0.2
StrcQ8VIM6 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
StrcQ8VIM6 AC069562.3-201ENSMUST00000225387 587 ntBASIC16.31■□□□□ 0.2
StrcQ8VIM6 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
StrcQ8VIM6 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
StrcQ8VIM6 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.31■□□□□ 0.2
StrcQ8VIM6 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
StrcQ8VIM6 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
StrcQ8VIM6 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
StrcQ8VIM6 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
StrcQ8VIM6 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
StrcQ8VIM6 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC16.31■□□□□ 0.2
StrcQ8VIM6 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
StrcQ8VIM6 Gm4760-201ENSMUST00000119663 1030 ntBASIC16.31■□□□□ 0.2
StrcQ8VIM6 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
StrcQ8VIM6 Gm12566-201ENSMUST00000121479 359 ntBASIC16.31■□□□□ 0.2
StrcQ8VIM6 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC16.31■□□□□ 0.2
StrcQ8VIM6 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
StrcQ8VIM6 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
StrcQ8VIM6 Gm8738-201ENSMUST00000172606 329 ntBASIC16.31■□□□□ 0.2
StrcQ8VIM6 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
StrcQ8VIM6 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
StrcQ8VIM6 Gm9004-201ENSMUST00000218739 1222 ntBASIC16.31■□□□□ 0.2
StrcQ8VIM6 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
StrcQ8VIM6 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
StrcQ8VIM6 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
StrcQ8VIM6 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
StrcQ8VIM6 Gm19221-201ENSMUST00000221827 1477 ntBASIC16.31■□□□□ 0.2
StrcQ8VIM6 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
StrcQ8VIM6 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
StrcQ8VIM6 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.3■□□□□ 0.2
StrcQ8VIM6 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
StrcQ8VIM6 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
StrcQ8VIM6 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
StrcQ8VIM6 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
StrcQ8VIM6 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
StrcQ8VIM6 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
StrcQ8VIM6 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
StrcQ8VIM6 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
StrcQ8VIM6 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC16.3■□□□□ 0.2
StrcQ8VIM6 Gm8885-201ENSMUST00000189382 598 ntBASIC16.3■□□□□ 0.2
StrcQ8VIM6 CT025533.2-201ENSMUST00000228715 1248 ntBASIC16.3■□□□□ 0.2
StrcQ8VIM6 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms