Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Odf4Q8VI88 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Odf4Q8VI88 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Odf4Q8VI88 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Odf4Q8VI88 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Odf4Q8VI88 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Odf4Q8VI88 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Odf4Q8VI88 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Odf4Q8VI88 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Odf4Q8VI88 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Odf4Q8VI88 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.63□□□□□ -0.39
Odf4Q8VI88 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Odf4Q8VI88 Gm11543-201ENSMUST00000120758 370 ntBASIC12.63□□□□□ -0.39
Odf4Q8VI88 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.63□□□□□ -0.39
Odf4Q8VI88 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.63□□□□□ -0.39
Odf4Q8VI88 Gm10253-201ENSMUST00000194270 940 ntBASIC12.63□□□□□ -0.39
Odf4Q8VI88 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.63□□□□□ -0.39
Odf4Q8VI88 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.63□□□□□ -0.39
Odf4Q8VI88 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.63□□□□□ -0.39
Odf4Q8VI88 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Odf4Q8VI88 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Odf4Q8VI88 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Odf4Q8VI88 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Odf4Q8VI88 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Odf4Q8VI88 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Odf4Q8VI88 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Odf4Q8VI88 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Odf4Q8VI88 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Odf4Q8VI88 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Odf4Q8VI88 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Odf4Q8VI88 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Odf4Q8VI88 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Odf4Q8VI88 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Odf4Q8VI88 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Odf4Q8VI88 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Odf4Q8VI88 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Odf4Q8VI88 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Odf4Q8VI88 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Odf4Q8VI88 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Odf4Q8VI88 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Odf4Q8VI88 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Odf4Q8VI88 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Odf4Q8VI88 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Odf4Q8VI88 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Odf4Q8VI88 Gm20949-201ENSMUST00000206478 952 ntBASIC12.62□□□□□ -0.39
Odf4Q8VI88 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.62□□□□□ -0.39
Odf4Q8VI88 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.62□□□□□ -0.39
Odf4Q8VI88 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Odf4Q8VI88 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Odf4Q8VI88 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Odf4Q8VI88 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Odf4Q8VI88 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Odf4Q8VI88 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Odf4Q8VI88 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Odf4Q8VI88 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Odf4Q8VI88 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.62□□□□□ -0.39
Odf4Q8VI88 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Odf4Q8VI88 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.62□□□□□ -0.39
Odf4Q8VI88 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Odf4Q8VI88 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Odf4Q8VI88 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Odf4Q8VI88 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Odf4Q8VI88 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Odf4Q8VI88 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Odf4Q8VI88 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Odf4Q8VI88 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Odf4Q8VI88 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Odf4Q8VI88 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Odf4Q8VI88 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Odf4Q8VI88 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Odf4Q8VI88 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Odf4Q8VI88 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.61□□□□□ -0.39
Odf4Q8VI88 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.61□□□□□ -0.39
Odf4Q8VI88 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Odf4Q8VI88 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Odf4Q8VI88 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Odf4Q8VI88 Gm6973-201ENSMUST00000117080 721 ntBASIC12.61□□□□□ -0.39
Odf4Q8VI88 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.61□□□□□ -0.39
Odf4Q8VI88 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.61□□□□□ -0.39
Odf4Q8VI88 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Odf4Q8VI88 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Odf4Q8VI88 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Odf4Q8VI88 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Odf4Q8VI88 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Odf4Q8VI88 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Odf4Q8VI88 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.61□□□□□ -0.39
Odf4Q8VI88 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.61□□□□□ -0.39
Odf4Q8VI88 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Odf4Q8VI88 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.61□□□□□ -0.39
Odf4Q8VI88 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Odf4Q8VI88 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Odf4Q8VI88 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Odf4Q8VI88 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Odf4Q8VI88 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Odf4Q8VI88 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Odf4Q8VI88 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Odf4Q8VI88 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Odf4Q8VI88 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Odf4Q8VI88 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.61□□□□□ -0.39
Odf4Q8VI88 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms