Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rpap2Q8VC34 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rpap2Q8VC34 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.42■□□□□ 0.06
Rpap2Q8VC34 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rpap2Q8VC34 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rpap2Q8VC34 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rpap2Q8VC34 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC15.42■□□□□ 0.06
Rpap2Q8VC34 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.42■□□□□ 0.06
Rpap2Q8VC34 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.42■□□□□ 0.06
Rpap2Q8VC34 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rpap2Q8VC34 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rpap2Q8VC34 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rpap2Q8VC34 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rpap2Q8VC34 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rpap2Q8VC34 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rpap2Q8VC34 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Rpap2Q8VC34 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
Rpap2Q8VC34 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rpap2Q8VC34 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.42■□□□□ 0.06
Rpap2Q8VC34 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rpap2Q8VC34 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rpap2Q8VC34 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rpap2Q8VC34 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Rpap2Q8VC34 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpap2Q8VC34 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Rpap2Q8VC34 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rpap2Q8VC34 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpap2Q8VC34 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Rpap2Q8VC34 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpap2Q8VC34 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpap2Q8VC34 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpap2Q8VC34 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpap2Q8VC34 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpap2Q8VC34 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rpap2Q8VC34 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Rpap2Q8VC34 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rpap2Q8VC34 Gm12585-201ENSMUST00000117307 290 ntBASIC15.41■□□□□ 0.06
Rpap2Q8VC34 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.41■□□□□ 0.06
Rpap2Q8VC34 Gm15393-201ENSMUST00000120499 219 ntBASIC15.41■□□□□ 0.06
Rpap2Q8VC34 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpap2Q8VC34 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpap2Q8VC34 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.41■□□□□ 0.06
Rpap2Q8VC34 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpap2Q8VC34 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rpap2Q8VC34 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpap2Q8VC34 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpap2Q8VC34 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rpap2Q8VC34 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Rpap2Q8VC34 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpap2Q8VC34 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rpap2Q8VC34 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpap2Q8VC34 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Rpap2Q8VC34 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Rpap2Q8VC34 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpap2Q8VC34 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Rpap2Q8VC34 AC159196.2-201ENSMUST00000224082 1622 ntBASIC15.4■□□□□ 0.06
Rpap2Q8VC34 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpap2Q8VC34 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpap2Q8VC34 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpap2Q8VC34 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Rpap2Q8VC34 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rpap2Q8VC34 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Rpap2Q8VC34 Gm6283-201ENSMUST00000182369 1000 ntBASIC15.4■□□□□ 0.06
Rpap2Q8VC34 Gm29741-201ENSMUST00000192667 421 ntBASIC15.4■□□□□ 0.06
Rpap2Q8VC34 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.4■□□□□ 0.06
Rpap2Q8VC34 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpap2Q8VC34 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpap2Q8VC34 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpap2Q8VC34 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Rpap2Q8VC34 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Rpap2Q8VC34 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rpap2Q8VC34 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpap2Q8VC34 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpap2Q8VC34 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Rpap2Q8VC34 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpap2Q8VC34 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Rpap2Q8VC34 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpap2Q8VC34 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpap2Q8VC34 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rpap2Q8VC34 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Rpap2Q8VC34 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Rpap2Q8VC34 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.4■□□□□ 0.06
Rpap2Q8VC34 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rpap2Q8VC34 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rpap2Q8VC34 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rpap2Q8VC34 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.39■□□□□ 0.05
Rpap2Q8VC34 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rpap2Q8VC34 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Rpap2Q8VC34 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rpap2Q8VC34 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rpap2Q8VC34 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rpap2Q8VC34 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rpap2Q8VC34 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.39■□□□□ 0.05
Rpap2Q8VC34 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Rpap2Q8VC34 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Rpap2Q8VC34 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rpap2Q8VC34 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rpap2Q8VC34 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rpap2Q8VC34 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rpap2Q8VC34 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms