Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Sf3a1Q8K4Z5 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Sf3a1Q8K4Z5 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Sf3a1Q8K4Z5 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sf3a1Q8K4Z5 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Sf3a1Q8K4Z5 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sf3a1Q8K4Z5 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Sf3a1Q8K4Z5 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Sf3a1Q8K4Z5 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Sf3a1Q8K4Z5 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sf3a1Q8K4Z5 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC17.2■□□□□ 0.34
Sf3a1Q8K4Z5 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sf3a1Q8K4Z5 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sf3a1Q8K4Z5 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Sf3a1Q8K4Z5 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sf3a1Q8K4Z5 Gm15460-201ENSMUST00000118147 391 ntBASIC17.2■□□□□ 0.34
Sf3a1Q8K4Z5 Gm7820-201ENSMUST00000121012 1052 ntBASIC17.2■□□□□ 0.34
Sf3a1Q8K4Z5 Gm12151-201ENSMUST00000121374 290 ntBASIC17.2■□□□□ 0.34
Sf3a1Q8K4Z5 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC17.2■□□□□ 0.34
Sf3a1Q8K4Z5 Gm3436-201ENSMUST00000179930 840 ntBASIC17.2■□□□□ 0.34
Sf3a1Q8K4Z5 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sf3a1Q8K4Z5 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sf3a1Q8K4Z5 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sf3a1Q8K4Z5 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sf3a1Q8K4Z5 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Sf3a1Q8K4Z5 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sf3a1Q8K4Z5 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sf3a1Q8K4Z5 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sf3a1Q8K4Z5 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sf3a1Q8K4Z5 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC17.2■□□□□ 0.34
Sf3a1Q8K4Z5 AC124751.1-201ENSMUST00000222716 1408 ntBASIC17.2■□□□□ 0.34
Sf3a1Q8K4Z5 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Sf3a1Q8K4Z5 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sf3a1Q8K4Z5 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sf3a1Q8K4Z5 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC17.2■□□□□ 0.34
Sf3a1Q8K4Z5 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sf3a1Q8K4Z5 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Sf3a1Q8K4Z5 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sf3a1Q8K4Z5 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sf3a1Q8K4Z5 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sf3a1Q8K4Z5 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sf3a1Q8K4Z5 AC126549.2-201ENSMUST00000223997 1976 ntBASIC17.19■□□□□ 0.34
Sf3a1Q8K4Z5 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC17.19■□□□□ 0.34
Sf3a1Q8K4Z5 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Sf3a1Q8K4Z5 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sf3a1Q8K4Z5 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sf3a1Q8K4Z5 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Sf3a1Q8K4Z5 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sf3a1Q8K4Z5 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sf3a1Q8K4Z5 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.19■□□□□ 0.34
Sf3a1Q8K4Z5 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sf3a1Q8K4Z5 AC154806.6-201ENSMUST00000228192 202 ntBASIC17.19■□□□□ 0.34
Sf3a1Q8K4Z5 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Sf3a1Q8K4Z5 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sf3a1Q8K4Z5 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sf3a1Q8K4Z5 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sf3a1Q8K4Z5 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sf3a1Q8K4Z5 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sf3a1Q8K4Z5 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sf3a1Q8K4Z5 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sf3a1Q8K4Z5 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sf3a1Q8K4Z5 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Sf3a1Q8K4Z5 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sf3a1Q8K4Z5 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3a1Q8K4Z5 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Sf3a1Q8K4Z5 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3a1Q8K4Z5 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3a1Q8K4Z5 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3a1Q8K4Z5 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3a1Q8K4Z5 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC17.18■□□□□ 0.34
Sf3a1Q8K4Z5 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3a1Q8K4Z5 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3a1Q8K4Z5 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3a1Q8K4Z5 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC17.18■□□□□ 0.34
Sf3a1Q8K4Z5 Gm8584-201ENSMUST00000171982 758 ntBASIC17.18■□□□□ 0.34
Sf3a1Q8K4Z5 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.18■□□□□ 0.34
Sf3a1Q8K4Z5 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3a1Q8K4Z5 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3a1Q8K4Z5 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3a1Q8K4Z5 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3a1Q8K4Z5 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3a1Q8K4Z5 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3a1Q8K4Z5 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3a1Q8K4Z5 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Sf3a1Q8K4Z5 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3a1Q8K4Z5 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Sf3a1Q8K4Z5 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Sf3a1Q8K4Z5 Gm44291-201ENSMUST00000203102 2865 ntBASIC17.18■□□□□ 0.34
Sf3a1Q8K4Z5 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sf3a1Q8K4Z5 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Sf3a1Q8K4Z5 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sf3a1Q8K4Z5 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sf3a1Q8K4Z5 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sf3a1Q8K4Z5 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sf3a1Q8K4Z5 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Sf3a1Q8K4Z5 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sf3a1Q8K4Z5 Gm4204-201ENSMUST00000110798 1231 ntBASIC17.17■□□□□ 0.34
Sf3a1Q8K4Z5 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC17.17■□□□□ 0.34
Sf3a1Q8K4Z5 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sf3a1Q8K4Z5 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms