Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.25□□□□□ -0.29
Rfwd3Q8CIK8 Gm27618-201ENSMUST00000183671 60 ntBASIC13.25□□□□□ -0.29
Rfwd3Q8CIK8 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.25□□□□□ -0.29
Rfwd3Q8CIK8 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.25□□□□□ -0.29
Rfwd3Q8CIK8 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.25□□□□□ -0.29
Rfwd3Q8CIK8 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfwd3Q8CIK8 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfwd3Q8CIK8 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfwd3Q8CIK8 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfwd3Q8CIK8 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.25□□□□□ -0.29
Rfwd3Q8CIK8 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfwd3Q8CIK8 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Rfwd3Q8CIK8 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.25□□□□□ -0.29
Rfwd3Q8CIK8 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Gm24543-201ENSMUST00000103867 82 ntBASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Gm27533-201ENSMUST00000183800 152 ntBASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfwd3Q8CIK8 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 Gm16476-201ENSMUST00000221544 139 ntBASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rfwd3Q8CIK8 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rfwd3Q8CIK8 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfwd3Q8CIK8 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfwd3Q8CIK8 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rfwd3Q8CIK8 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfwd3Q8CIK8 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Rfwd3Q8CIK8 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfwd3Q8CIK8 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Rfwd3Q8CIK8 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rfwd3Q8CIK8 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms