Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Syne4Q8CII8 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Syne4Q8CII8 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Syne4Q8CII8 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Syne4Q8CII8 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC15.8■□□□□ 0.12
Syne4Q8CII8 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC15.8■□□□□ 0.12
Syne4Q8CII8 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Syne4Q8CII8 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Syne4Q8CII8 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC15.8■□□□□ 0.12
Syne4Q8CII8 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC15.8■□□□□ 0.12
Syne4Q8CII8 Gm4971-201ENSMUST00000205991 1108 ntBASIC15.8■□□□□ 0.12
Syne4Q8CII8 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC15.8■□□□□ 0.12
Syne4Q8CII8 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC15.8■□□□□ 0.12
Syne4Q8CII8 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Syne4Q8CII8 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Syne4Q8CII8 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Syne4Q8CII8 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Syne4Q8CII8 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Syne4Q8CII8 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Syne4Q8CII8 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Syne4Q8CII8 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Syne4Q8CII8 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Syne4Q8CII8 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Syne4Q8CII8 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Syne4Q8CII8 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Syne4Q8CII8 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Syne4Q8CII8 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Syne4Q8CII8 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Syne4Q8CII8 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Syne4Q8CII8 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Syne4Q8CII8 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Syne4Q8CII8 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.79■□□□□ 0.12
Syne4Q8CII8 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Syne4Q8CII8 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Syne4Q8CII8 Mir698-201ENSMUST00000102164 109 ntBASIC15.79■□□□□ 0.12
Syne4Q8CII8 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Syne4Q8CII8 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Syne4Q8CII8 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Syne4Q8CII8 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Syne4Q8CII8 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Syne4Q8CII8 Mir8109-201ENSMUST00000184375 117 ntBASIC15.79■□□□□ 0.12
Syne4Q8CII8 Gm43822-201ENSMUST00000200285 476 ntBASIC15.79■□□□□ 0.12
Syne4Q8CII8 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Syne4Q8CII8 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Syne4Q8CII8 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Syne4Q8CII8 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Syne4Q8CII8 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Syne4Q8CII8 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Syne4Q8CII8 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Syne4Q8CII8 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Syne4Q8CII8 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Syne4Q8CII8 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Syne4Q8CII8 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Syne4Q8CII8 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Syne4Q8CII8 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Syne4Q8CII8 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Syne4Q8CII8 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Syne4Q8CII8 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Syne4Q8CII8 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Syne4Q8CII8 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Syne4Q8CII8 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Syne4Q8CII8 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Syne4Q8CII8 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Syne4Q8CII8 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Syne4Q8CII8 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Syne4Q8CII8 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Syne4Q8CII8 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Syne4Q8CII8 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Syne4Q8CII8 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Syne4Q8CII8 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Syne4Q8CII8 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Syne4Q8CII8 Gm8213-201ENSMUST00000118191 441 ntBASIC15.78■□□□□ 0.12
Syne4Q8CII8 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Syne4Q8CII8 Gm1335-201ENSMUST00000121653 386 ntBASIC15.78■□□□□ 0.12
Syne4Q8CII8 Gm10156-201ENSMUST00000122364 462 ntBASIC15.78■□□□□ 0.12
Syne4Q8CII8 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC15.78■□□□□ 0.12
Syne4Q8CII8 Gm27516-201ENSMUST00000184237 98 ntBASIC15.78■□□□□ 0.12
Syne4Q8CII8 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Syne4Q8CII8 Gm29741-201ENSMUST00000192667 421 ntBASIC15.78■□□□□ 0.12
Syne4Q8CII8 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC15.78■□□□□ 0.12
Syne4Q8CII8 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Syne4Q8CII8 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Syne4Q8CII8 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Syne4Q8CII8 Gm24447-201ENSMUST00000083977 338 ntBASIC15.78■□□□□ 0.12
Syne4Q8CII8 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Syne4Q8CII8 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Syne4Q8CII8 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Syne4Q8CII8 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Syne4Q8CII8 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Syne4Q8CII8 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Syne4Q8CII8 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Syne4Q8CII8 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.78■□□□□ 0.12
Syne4Q8CII8 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Syne4Q8CII8 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Syne4Q8CII8 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.78■□□□□ 0.12
Syne4Q8CII8 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Syne4Q8CII8 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Syne4Q8CII8 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Syne4Q8CII8 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Syne4Q8CII8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms