Protein–RNA interactions for Protein: Q8CFL8

Zswim3, Zinc finger SWIM domain-containing protein 3, mousemouse

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zswim3Q8CFL8 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zswim3Q8CFL8 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.33■□□□□ 0.04
Zswim3Q8CFL8 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC15.33■□□□□ 0.04
Zswim3Q8CFL8 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC15.33■□□□□ 0.04
Zswim3Q8CFL8 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Zswim3Q8CFL8 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Zswim3Q8CFL8 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zswim3Q8CFL8 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Zswim3Q8CFL8 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Zswim3Q8CFL8 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zswim3Q8CFL8 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zswim3Q8CFL8 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zswim3Q8CFL8 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Zswim3Q8CFL8 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zswim3Q8CFL8 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Zswim3Q8CFL8 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zswim3Q8CFL8 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Zswim3Q8CFL8 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Zswim3Q8CFL8 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Zswim3Q8CFL8 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Zswim3Q8CFL8 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Gm11793-201ENSMUST00000120433 981 ntBASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Gm6152-201ENSMUST00000151704 340 ntBASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Gm37259-201ENSMUST00000193903 849 ntBASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Gm9176-201ENSMUST00000219955 1120 ntBASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zswim3Q8CFL8 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zswim3Q8CFL8 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Zswim3Q8CFL8 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zswim3Q8CFL8 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Zswim3Q8CFL8 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Zswim3Q8CFL8 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Zswim3Q8CFL8 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zswim3Q8CFL8 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zswim3Q8CFL8 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.31■□□□□ 0.04
Zswim3Q8CFL8 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zswim3Q8CFL8 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Zswim3Q8CFL8 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zswim3Q8CFL8 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC15.31■□□□□ 0.04
Zswim3Q8CFL8 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Zswim3Q8CFL8 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC15.31■□□□□ 0.04
Zswim3Q8CFL8 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC15.31■□□□□ 0.04
Zswim3Q8CFL8 Gm4271-201ENSMUST00000174444 973 ntBASIC15.31■□□□□ 0.04
Zswim3Q8CFL8 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC15.31■□□□□ 0.04
Zswim3Q8CFL8 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Zswim3Q8CFL8 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC15.31■□□□□ 0.04
Zswim3Q8CFL8 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC15.31■□□□□ 0.04
Zswim3Q8CFL8 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zswim3Q8CFL8 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zswim3Q8CFL8 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Zswim3Q8CFL8 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zswim3Q8CFL8 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Zswim3Q8CFL8 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zswim3Q8CFL8 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Zswim3Q8CFL8 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Zswim3Q8CFL8 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Zswim3Q8CFL8 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC15.3■□□□□ 0.04
Zswim3Q8CFL8 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Zswim3Q8CFL8 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Zswim3Q8CFL8 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC15.3■□□□□ 0.04
Zswim3Q8CFL8 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC15.3■□□□□ 0.04
Zswim3Q8CFL8 Gm43133-201ENSMUST00000197472 463 ntBASIC15.3■□□□□ 0.04
Zswim3Q8CFL8 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Zswim3Q8CFL8 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC15.3■□□□□ 0.04
Zswim3Q8CFL8 Gm18935-201ENSMUST00000212692 664 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms