Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc28bQ8CEG5 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc28bQ8CEG5 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc28bQ8CEG5 Birc2-201ENSMUST00000054878 378 ntBASIC13.91□□□□□ -0.18
Ccdc28bQ8CEG5 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc28bQ8CEG5 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc28bQ8CEG5 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ccdc28bQ8CEG5 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc28bQ8CEG5 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc28bQ8CEG5 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc28bQ8CEG5 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc28bQ8CEG5 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc28bQ8CEG5 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc28bQ8CEG5 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc28bQ8CEG5 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc28bQ8CEG5 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc28bQ8CEG5 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc28bQ8CEG5 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc28bQ8CEG5 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc28bQ8CEG5 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc28bQ8CEG5 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc28bQ8CEG5 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc28bQ8CEG5 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc28bQ8CEG5 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Ccdc28bQ8CEG5 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc28bQ8CEG5 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.9□□□□□ -0.18
Ccdc28bQ8CEG5 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.9□□□□□ -0.18
Ccdc28bQ8CEG5 Rps4l-201ENSMUST00000071745 943 ntBASIC13.9□□□□□ -0.18
Ccdc28bQ8CEG5 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.9□□□□□ -0.18
Ccdc28bQ8CEG5 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.9□□□□□ -0.18
Ccdc28bQ8CEG5 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.9□□□□□ -0.18
Ccdc28bQ8CEG5 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc28bQ8CEG5 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc28bQ8CEG5 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc28bQ8CEG5 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Ccdc28bQ8CEG5 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc28bQ8CEG5 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc28bQ8CEG5 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc28bQ8CEG5 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.9□□□□□ -0.18
Ccdc28bQ8CEG5 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc28bQ8CEG5 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Ccdc28bQ8CEG5 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Ccdc28bQ8CEG5 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Gm27459-201ENSMUST00000184860 107 ntBASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Gm45098-201ENSMUST00000207179 657 ntBASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc28bQ8CEG5 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ccdc28bQ8CEG5 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.88□□□□□ -0.19
Ccdc28bQ8CEG5 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc28bQ8CEG5 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ccdc28bQ8CEG5 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc28bQ8CEG5 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.88□□□□□ -0.19
Ccdc28bQ8CEG5 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.88□□□□□ -0.19
Ccdc28bQ8CEG5 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.88□□□□□ -0.19
Ccdc28bQ8CEG5 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc28bQ8CEG5 AV026068-213ENSMUST00000223675 1171 ntBASIC13.88□□□□□ -0.19
Ccdc28bQ8CEG5 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Ccdc28bQ8CEG5 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.88□□□□□ -0.19
Ccdc28bQ8CEG5 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.88□□□□□ -0.19
Ccdc28bQ8CEG5 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc28bQ8CEG5 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc28bQ8CEG5 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc28bQ8CEG5 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc28bQ8CEG5 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.88□□□□□ -0.19
Ccdc28bQ8CEG5 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc28bQ8CEG5 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms