Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.11■□□□□ 0.01
Vcpip1Q8CDG3 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Vcpip1Q8CDG3 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vcpip1Q8CDG3 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vcpip1Q8CDG3 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vcpip1Q8CDG3 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vcpip1Q8CDG3 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Vcpip1Q8CDG3 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vcpip1Q8CDG3 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Vcpip1Q8CDG3 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vcpip1Q8CDG3 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vcpip1Q8CDG3 Gm38225-201ENSMUST00000194001 393 ntBASIC15.1■□□□□ 0.01
Vcpip1Q8CDG3 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vcpip1Q8CDG3 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vcpip1Q8CDG3 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vcpip1Q8CDG3 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vcpip1Q8CDG3 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vcpip1Q8CDG3 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vcpip1Q8CDG3 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vcpip1Q8CDG3 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vcpip1Q8CDG3 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Vcpip1Q8CDG3 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.1■□□□□ 0.01
Vcpip1Q8CDG3 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.1■□□□□ 0.01
Vcpip1Q8CDG3 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vcpip1Q8CDG3 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vcpip1Q8CDG3 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vcpip1Q8CDG3 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vcpip1Q8CDG3 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Vcpip1Q8CDG3 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vcpip1Q8CDG3 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.1■□□□□ 0.01
Vcpip1Q8CDG3 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vcpip1Q8CDG3 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vcpip1Q8CDG3 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vcpip1Q8CDG3 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vcpip1Q8CDG3 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vcpip1Q8CDG3 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Vcpip1Q8CDG3 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.09■□□□□ 0.01
Vcpip1Q8CDG3 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Vcpip1Q8CDG3 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vcpip1Q8CDG3 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vcpip1Q8CDG3 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Vcpip1Q8CDG3 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Vcpip1Q8CDG3 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vcpip1Q8CDG3 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vcpip1Q8CDG3 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vcpip1Q8CDG3 AA543401-201ENSMUST00000164248 1269 ntBASIC15.09■□□□□ 0.01
Vcpip1Q8CDG3 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Vcpip1Q8CDG3 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.09■□□□□ 0.01
Vcpip1Q8CDG3 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.09■□□□□ 0.01
Vcpip1Q8CDG3 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vcpip1Q8CDG3 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Vcpip1Q8CDG3 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vcpip1Q8CDG3 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vcpip1Q8CDG3 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vcpip1Q8CDG3 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vcpip1Q8CDG3 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vcpip1Q8CDG3 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vcpip1Q8CDG3 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vcpip1Q8CDG3 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.09■□□□□ 0.01
Vcpip1Q8CDG3 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Vcpip1Q8CDG3 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vcpip1Q8CDG3 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vcpip1Q8CDG3 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vcpip1Q8CDG3 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Vcpip1Q8CDG3 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vcpip1Q8CDG3 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vcpip1Q8CDG3 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vcpip1Q8CDG3 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.08■□□□□ 0.01
Vcpip1Q8CDG3 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Vcpip1Q8CDG3 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Gm11745-201ENSMUST00000121669 448 ntBASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Mir1895-201ENSMUST00000122615 79 ntBASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Gm27494-201ENSMUST00000184735 189 ntBASIC15.08■□□□□ 0
Vcpip1Q8CDG3 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.08■□□□□ 0
Vcpip1Q8CDG3 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms