Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Gm28630-201ENSMUST00000187806 498 ntBASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Mir125a-201ENSMUST00000083545 68 ntBASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sh3rf3Q8C120 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Gm15957-201ENSMUST00000118893 974 ntBASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Gm12428-201ENSMUST00000119844 727 ntBASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Dupd1-202ENSMUST00000224735 548 ntBASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.65□□□□□ -0.06
Sh3rf3Q8C120 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf3Q8C120 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Sh3rf3Q8C120 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Sh3rf3Q8C120 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf3Q8C120 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.64□□□□□ -0.07
Sh3rf3Q8C120 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.64□□□□□ -0.07
Sh3rf3Q8C120 Gm15693-201ENSMUST00000120470 637 ntBASIC14.64□□□□□ -0.07
Sh3rf3Q8C120 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf3Q8C120 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf3Q8C120 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf3Q8C120 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.64□□□□□ -0.07
Sh3rf3Q8C120 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Sh3rf3Q8C120 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf3Q8C120 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf3Q8C120 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf3Q8C120 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf3Q8C120 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf3Q8C120 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Sh3rf3Q8C120 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf3Q8C120 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf3Q8C120 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf3Q8C120 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sh3rf3Q8C120 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms