Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf2Q8BZT2 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Sh3rf2Q8BZT2 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sh3rf2Q8BZT2 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.21□□□□□ -0.13
Sh3rf2Q8BZT2 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Sh3rf2Q8BZT2 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sh3rf2Q8BZT2 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sh3rf2Q8BZT2 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sh3rf2Q8BZT2 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sh3rf2Q8BZT2 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sh3rf2Q8BZT2 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sh3rf2Q8BZT2 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sh3rf2Q8BZT2 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sh3rf2Q8BZT2 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.21□□□□□ -0.13
Sh3rf2Q8BZT2 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sh3rf2Q8BZT2 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sh3rf2Q8BZT2 Gm27701-201ENSMUST00000184498 110 ntBASIC14.21□□□□□ -0.13
Sh3rf2Q8BZT2 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.21□□□□□ -0.13
Sh3rf2Q8BZT2 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.21□□□□□ -0.13
Sh3rf2Q8BZT2 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sh3rf2Q8BZT2 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sh3rf2Q8BZT2 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sh3rf2Q8BZT2 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sh3rf2Q8BZT2 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Sh3rf2Q8BZT2 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Sh3rf2Q8BZT2 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.21□□□□□ -0.14
Sh3rf2Q8BZT2 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Sh3rf2Q8BZT2 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sh3rf2Q8BZT2 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Gm15806-201ENSMUST00000120696 955 ntBASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Gm8602-201ENSMUST00000184045 607 ntBASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Gm28911-201ENSMUST00000188837 117 ntBASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sh3rf2Q8BZT2 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Sh3rf2Q8BZT2 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms