Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rd3Q8BRE0 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Rd3Q8BRE0 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rd3Q8BRE0 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Rd3Q8BRE0 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rd3Q8BRE0 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Rd3Q8BRE0 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rd3Q8BRE0 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.87□□□□□ -0.03
Rd3Q8BRE0 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.87□□□□□ -0.03
Rd3Q8BRE0 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.87□□□□□ -0.03
Rd3Q8BRE0 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.87□□□□□ -0.03
Rd3Q8BRE0 Gm18905-201ENSMUST00000205454 928 ntBASIC14.87□□□□□ -0.03
Rd3Q8BRE0 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.87□□□□□ -0.03
Rd3Q8BRE0 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.87□□□□□ -0.03
Rd3Q8BRE0 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rd3Q8BRE0 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rd3Q8BRE0 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rd3Q8BRE0 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rd3Q8BRE0 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rd3Q8BRE0 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rd3Q8BRE0 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Rd3Q8BRE0 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rd3Q8BRE0 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rd3Q8BRE0 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rd3Q8BRE0 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rd3Q8BRE0 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Rd3Q8BRE0 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rd3Q8BRE0 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rd3Q8BRE0 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.87□□□□□ -0.03
Rd3Q8BRE0 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rd3Q8BRE0 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rd3Q8BRE0 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rd3Q8BRE0 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rd3Q8BRE0 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rd3Q8BRE0 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rd3Q8BRE0 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Rd3Q8BRE0 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rd3Q8BRE0 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.86□□□□□ -0.03
Rd3Q8BRE0 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rd3Q8BRE0 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.86□□□□□ -0.03
Rd3Q8BRE0 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rd3Q8BRE0 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rd3Q8BRE0 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Rd3Q8BRE0 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Rd3Q8BRE0 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rd3Q8BRE0 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Rd3Q8BRE0 Gm44608-201ENSMUST00000206827 855 ntBASIC14.86□□□□□ -0.03
Rd3Q8BRE0 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.86□□□□□ -0.03
Rd3Q8BRE0 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rd3Q8BRE0 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rd3Q8BRE0 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rd3Q8BRE0 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rd3Q8BRE0 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rd3Q8BRE0 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.86□□□□□ -0.03
Rd3Q8BRE0 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rd3Q8BRE0 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Rd3Q8BRE0 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rd3Q8BRE0 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rd3Q8BRE0 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Rd3Q8BRE0 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rd3Q8BRE0 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rd3Q8BRE0 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rd3Q8BRE0 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rd3Q8BRE0 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rd3Q8BRE0 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rd3Q8BRE0 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rd3Q8BRE0 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rd3Q8BRE0 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
Rd3Q8BRE0 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rd3Q8BRE0 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rd3Q8BRE0 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.85□□□□□ -0.03
Rd3Q8BRE0 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.85□□□□□ -0.03
Rd3Q8BRE0 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.85□□□□□ -0.03
Rd3Q8BRE0 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Rd3Q8BRE0 Gm27839-201ENSMUST00000184242 106 ntBASIC14.85□□□□□ -0.03
Rd3Q8BRE0 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.85□□□□□ -0.03
Rd3Q8BRE0 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.85□□□□□ -0.03
Rd3Q8BRE0 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.85□□□□□ -0.03
Rd3Q8BRE0 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rd3Q8BRE0 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Rd3Q8BRE0 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rd3Q8BRE0 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rd3Q8BRE0 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Rd3Q8BRE0 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Rd3Q8BRE0 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Rd3Q8BRE0 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rd3Q8BRE0 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rd3Q8BRE0 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rd3Q8BRE0 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rd3Q8BRE0 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rd3Q8BRE0 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rd3Q8BRE0 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.84□□□□□ -0.03
Rd3Q8BRE0 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rd3Q8BRE0 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.84□□□□□ -0.03
Rd3Q8BRE0 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rd3Q8BRE0 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.84□□□□□ -0.03
Rd3Q8BRE0 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.84□□□□□ -0.03
Rd3Q8BRE0 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rd3Q8BRE0 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rd3Q8BRE0 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms