Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4Q8BQZ5 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.67□□□□□ -0.22
Cpsf4Q8BQZ5 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4Q8BQZ5 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4Q8BQZ5 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4Q8BQZ5 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Cpsf4Q8BQZ5 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4Q8BQZ5 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.65□□□□□ -0.22
Cpsf4Q8BQZ5 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4Q8BQZ5 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4Q8BQZ5 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4Q8BQZ5 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cpsf4Q8BQZ5 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4Q8BQZ5 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4Q8BQZ5 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cpsf4Q8BQZ5 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.65□□□□□ -0.22
Cpsf4Q8BQZ5 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4Q8BQZ5 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.65□□□□□ -0.22
Cpsf4Q8BQZ5 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cpsf4Q8BQZ5 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cpsf4Q8BQZ5 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cpsf4Q8BQZ5 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.65□□□□□ -0.22
Cpsf4Q8BQZ5 Gm15920-201ENSMUST00000118998 402 ntBASIC13.65□□□□□ -0.22
Cpsf4Q8BQZ5 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.65□□□□□ -0.22
Cpsf4Q8BQZ5 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4Q8BQZ5 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4Q8BQZ5 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4Q8BQZ5 Gm22175-201ENSMUST00000175007 78 ntBASIC13.65□□□□□ -0.22
Cpsf4Q8BQZ5 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4Q8BQZ5 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.65□□□□□ -0.22
Cpsf4Q8BQZ5 Gm45098-201ENSMUST00000207179 657 ntBASIC13.65□□□□□ -0.22
Cpsf4Q8BQZ5 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4Q8BQZ5 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Cpsf4Q8BQZ5 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4Q8BQZ5 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.65□□□□□ -0.22
Cpsf4Q8BQZ5 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4Q8BQZ5 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4Q8BQZ5 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4Q8BQZ5 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4Q8BQZ5 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4Q8BQZ5 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpsf4Q8BQZ5 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cpsf4Q8BQZ5 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Cpsf4Q8BQZ5 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cpsf4Q8BQZ5 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Cpsf4Q8BQZ5 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.64□□□□□ -0.23
Cpsf4Q8BQZ5 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf4Q8BQZ5 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf4Q8BQZ5 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf4Q8BQZ5 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cpsf4Q8BQZ5 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf4Q8BQZ5 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Cpsf4Q8BQZ5 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cpsf4Q8BQZ5 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.64□□□□□ -0.23
Cpsf4Q8BQZ5 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms