Protein–RNA interactions for Protein: Q8BQN5

Fam78b, Protein FAM78B, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78bQ8BQN5 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fam78bQ8BQN5 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Fam78bQ8BQN5 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fam78bQ8BQN5 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Fam78bQ8BQN5 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fam78bQ8BQN5 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fam78bQ8BQN5 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.28□□□□□ -0.6
Fam78bQ8BQN5 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fam78bQ8BQN5 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Fam78bQ8BQN5 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Fam78bQ8BQN5 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fam78bQ8BQN5 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Fam78bQ8BQN5 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Fam78bQ8BQN5 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Fam78bQ8BQN5 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
Fam78bQ8BQN5 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Fam78bQ8BQN5 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Fam78bQ8BQN5 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Fam78bQ8BQN5 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Fam78bQ8BQN5 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Fam78bQ8BQN5 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Fam78bQ8BQN5 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 AC025913.2-201ENSMUST00000220136 1766 ntBASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Gm5864-201ENSMUST00000202263 970 ntBASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.27□□□□□ -0.61
Fam78bQ8BQN5 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fam78bQ8BQN5 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Fam78bQ8BQN5 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC11.26□□□□□ -0.61
Fam78bQ8BQN5 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fam78bQ8BQN5 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fam78bQ8BQN5 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Fam78bQ8BQN5 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Fam78bQ8BQN5 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fam78bQ8BQN5 Tcf21-202ENSMUST00000218002 1788 ntBASIC11.26□□□□□ -0.61
Fam78bQ8BQN5 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Fam78bQ8BQN5 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Fam78bQ8BQN5 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fam78bQ8BQN5 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.26□□□□□ -0.61
Fam78bQ8BQN5 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fam78bQ8BQN5 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.26□□□□□ -0.61
Fam78bQ8BQN5 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fam78bQ8BQN5 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Fam78bQ8BQN5 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Fam78bQ8BQN5 Gm7862-201ENSMUST00000121461 292 ntBASIC11.26□□□□□ -0.61
Fam78bQ8BQN5 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Fam78bQ8BQN5 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.26□□□□□ -0.61
Fam78bQ8BQN5 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.26□□□□□ -0.61
Fam78bQ8BQN5 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Fam78bQ8BQN5 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fam78bQ8BQN5 Gm7230-201ENSMUST00000173026 815 ntBASIC11.26□□□□□ -0.61
Fam78bQ8BQN5 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.26□□□□□ -0.61
Fam78bQ8BQN5 Gm28659-201ENSMUST00000188013 759 ntBASIC11.26□□□□□ -0.61
Fam78bQ8BQN5 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Fam78bQ8BQN5 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fam78bQ8BQN5 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fam78bQ8BQN5 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms