Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm45684-201ENSMUST00000210244 1571 ntBASIC18.1■□□□□ 0.49
Col16a1Q8BLX7 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Col16a1Q8BLX7 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Col16a1Q8BLX7 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col16a1Q8BLX7 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Col16a1Q8BLX7 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC18.1■□□□□ 0.49
Col16a1Q8BLX7 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC18.1■□□□□ 0.49
Col16a1Q8BLX7 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Col16a1Q8BLX7 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Col16a1Q8BLX7 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC18.1■□□□□ 0.49
Col16a1Q8BLX7 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col16a1Q8BLX7 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC18.09■□□□□ 0.49
Col16a1Q8BLX7 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col16a1Q8BLX7 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Col16a1Q8BLX7 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col16a1Q8BLX7 Gm2991-201ENSMUST00000173338 480 ntBASIC18.09■□□□□ 0.49
Col16a1Q8BLX7 Gm38144-201ENSMUST00000192790 465 ntBASIC18.09■□□□□ 0.49
Col16a1Q8BLX7 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Col16a1Q8BLX7 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC18.09■□□□□ 0.49
Col16a1Q8BLX7 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col16a1Q8BLX7 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col16a1Q8BLX7 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col16a1Q8BLX7 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col16a1Q8BLX7 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col16a1Q8BLX7 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col16a1Q8BLX7 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Col16a1Q8BLX7 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col16a1Q8BLX7 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col16a1Q8BLX7 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col16a1Q8BLX7 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col16a1Q8BLX7 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC18.09■□□□□ 0.49
Col16a1Q8BLX7 AC153366.2-201ENSMUST00000219461 1984 ntBASIC18.09■□□□□ 0.49
Col16a1Q8BLX7 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col16a1Q8BLX7 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col16a1Q8BLX7 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col16a1Q8BLX7 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col16a1Q8BLX7 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col16a1Q8BLX7 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col16a1Q8BLX7 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Col16a1Q8BLX7 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Col16a1Q8BLX7 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Col16a1Q8BLX7 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Col16a1Q8BLX7 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Col16a1Q8BLX7 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Col16a1Q8BLX7 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC18.08■□□□□ 0.49
Col16a1Q8BLX7 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Col16a1Q8BLX7 Gm17376-201ENSMUST00000166016 84 ntBASIC18.08■□□□□ 0.49
Col16a1Q8BLX7 Gm7046-201ENSMUST00000221351 977 ntBASIC18.08■□□□□ 0.49
Col16a1Q8BLX7 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC18.08■□□□□ 0.49
Col16a1Q8BLX7 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col16a1Q8BLX7 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col16a1Q8BLX7 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Col16a1Q8BLX7 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col16a1Q8BLX7 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col16a1Q8BLX7 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Col16a1Q8BLX7 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col16a1Q8BLX7 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.08■□□□□ 0.49
Col16a1Q8BLX7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col16a1Q8BLX7 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Col16a1Q8BLX7 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col16a1Q8BLX7 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Col16a1Q8BLX7 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col16a1Q8BLX7 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC18.08■□□□□ 0.48
Col16a1Q8BLX7 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col16a1Q8BLX7 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col16a1Q8BLX7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col16a1Q8BLX7 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Col16a1Q8BLX7 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col16a1Q8BLX7 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Col16a1Q8BLX7 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col16a1Q8BLX7 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Col16a1Q8BLX7 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC18.08■□□□□ 0.48
Col16a1Q8BLX7 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC18.08■□□□□ 0.48
Col16a1Q8BLX7 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC18.08■□□□□ 0.48
Col16a1Q8BLX7 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Col16a1Q8BLX7 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Col16a1Q8BLX7 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col16a1Q8BLX7 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col16a1Q8BLX7 Gm3695-201ENSMUST00000087222 1009 ntBASIC18.08■□□□□ 0.48
Col16a1Q8BLX7 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col16a1Q8BLX7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col16a1Q8BLX7 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col16a1Q8BLX7 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col16a1Q8BLX7 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col16a1Q8BLX7 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col16a1Q8BLX7 Abhd6-203ENSMUST00000225234 1958 ntBASIC18.07■□□□□ 0.48
Col16a1Q8BLX7 Gm44207-201ENSMUST00000204568 1424 ntBASIC18.07■□□□□ 0.48
Col16a1Q8BLX7 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col16a1Q8BLX7 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col16a1Q8BLX7 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col16a1Q8BLX7 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col16a1Q8BLX7 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC18.07■□□□□ 0.48
Col16a1Q8BLX7 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC18.07■□□□□ 0.48
Col16a1Q8BLX7 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC18.07■□□□□ 0.48
Col16a1Q8BLX7 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col16a1Q8BLX7 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col16a1Q8BLX7 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col16a1Q8BLX7 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col16a1Q8BLX7 Gm3756-201ENSMUST00000169182 1355 ntBASIC18.07■□□□□ 0.48
Col16a1Q8BLX7 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms