Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gm11960-202ENSMUST00000181063 2858 ntBASIC19.63■□□□□ 0.73
Usp54Q8BL06 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC19.63■□□□□ 0.73
Usp54Q8BL06 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp54Q8BL06 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp54Q8BL06 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp54Q8BL06 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp54Q8BL06 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp54Q8BL06 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp54Q8BL06 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Usp54Q8BL06 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC19.62■□□□□ 0.73
Usp54Q8BL06 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC19.62■□□□□ 0.73
Usp54Q8BL06 Gm42627-201ENSMUST00000197347 224 ntBASIC19.62■□□□□ 0.73
Usp54Q8BL06 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Usp54Q8BL06 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Usp54Q8BL06 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC19.62■□□□□ 0.73
Usp54Q8BL06 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp54Q8BL06 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp54Q8BL06 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp54Q8BL06 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Usp54Q8BL06 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Usp54Q8BL06 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp54Q8BL06 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Usp54Q8BL06 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp54Q8BL06 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp54Q8BL06 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp54Q8BL06 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp54Q8BL06 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Usp54Q8BL06 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp54Q8BL06 Gm15808-201ENSMUST00000119046 604 ntBASIC19.61■□□□□ 0.73
Usp54Q8BL06 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Usp54Q8BL06 Gm3890-201ENSMUST00000182416 207 ntBASIC19.61■□□□□ 0.73
Usp54Q8BL06 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC19.61■□□□□ 0.73
Usp54Q8BL06 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Usp54Q8BL06 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Usp54Q8BL06 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp54Q8BL06 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.61■□□□□ 0.73
Usp54Q8BL06 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp54Q8BL06 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp54Q8BL06 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC19.61■□□□□ 0.73
Usp54Q8BL06 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp54Q8BL06 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp54Q8BL06 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Usp54Q8BL06 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC19.61■□□□□ 0.73
Usp54Q8BL06 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp54Q8BL06 Gm16202-201ENSMUST00000117532 544 ntBASIC19.61■□□□□ 0.73
Usp54Q8BL06 Gm7809-201ENSMUST00000153199 742 ntBASIC19.61■□□□□ 0.73
Usp54Q8BL06 Gm2991-201ENSMUST00000173338 480 ntBASIC19.61■□□□□ 0.73
Usp54Q8BL06 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC19.61■□□□□ 0.73
Usp54Q8BL06 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp54Q8BL06 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp54Q8BL06 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC19.61■□□□□ 0.73
Usp54Q8BL06 Gm16372-201ENSMUST00000073088 450 ntBASIC19.61■□□□□ 0.73
Usp54Q8BL06 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp54Q8BL06 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp54Q8BL06 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp54Q8BL06 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp54Q8BL06 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp54Q8BL06 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Usp54Q8BL06 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp54Q8BL06 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp54Q8BL06 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp54Q8BL06 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp54Q8BL06 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp54Q8BL06 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp54Q8BL06 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp54Q8BL06 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp54Q8BL06 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Usp54Q8BL06 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Usp54Q8BL06 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp54Q8BL06 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp54Q8BL06 Gm12241-201ENSMUST00000118330 726 ntBASIC19.6■□□□□ 0.73
Usp54Q8BL06 Gm11591-201ENSMUST00000120063 702 ntBASIC19.6■□□□□ 0.73
Usp54Q8BL06 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Usp54Q8BL06 Gm6621-201ENSMUST00000193251 772 ntBASIC19.6■□□□□ 0.73
Usp54Q8BL06 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp54Q8BL06 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp54Q8BL06 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Usp54Q8BL06 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC19.6■□□□□ 0.73
Usp54Q8BL06 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp54Q8BL06 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Usp54Q8BL06 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp54Q8BL06 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp54Q8BL06 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp54Q8BL06 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp54Q8BL06 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp54Q8BL06 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Usp54Q8BL06 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp54Q8BL06 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp54Q8BL06 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Usp54Q8BL06 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Usp54Q8BL06 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp54Q8BL06 Gm44364-201ENSMUST00000198368 141 ntBASIC19.59■□□□□ 0.73
Usp54Q8BL06 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC19.59■□□□□ 0.73
Usp54Q8BL06 Gm44069-201ENSMUST00000204898 506 ntBASIC19.59■□□□□ 0.73
Usp54Q8BL06 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC19.59■□□□□ 0.73
Usp54Q8BL06 Gm7046-201ENSMUST00000221351 977 ntBASIC19.59■□□□□ 0.73
Usp54Q8BL06 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Usp54Q8BL06 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Usp54Q8BL06 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp54Q8BL06 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms