Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clrn3Q8BHH8 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Clrn3Q8BHH8 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Clrn3Q8BHH8 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Clrn3Q8BHH8 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.24□□□□□ -0.29
Clrn3Q8BHH8 Gm24158-201ENSMUST00000175263 71 ntBASIC13.24□□□□□ -0.29
Clrn3Q8BHH8 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Clrn3Q8BHH8 Gm43474-201ENSMUST00000196415 774 ntBASIC13.24□□□□□ -0.29
Clrn3Q8BHH8 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Clrn3Q8BHH8 Gm5312-201ENSMUST00000203728 547 ntBASIC13.24□□□□□ -0.29
Clrn3Q8BHH8 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.24□□□□□ -0.29
Clrn3Q8BHH8 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.24□□□□□ -0.29
Clrn3Q8BHH8 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Clrn3Q8BHH8 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Clrn3Q8BHH8 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Clrn3Q8BHH8 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Clrn3Q8BHH8 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clrn3Q8BHH8 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clrn3Q8BHH8 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.24□□□□□ -0.29
Clrn3Q8BHH8 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clrn3Q8BHH8 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clrn3Q8BHH8 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Clrn3Q8BHH8 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Gm26308-201ENSMUST00000157768 69 ntBASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Gm10253-201ENSMUST00000194270 940 ntBASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Gm8396-201ENSMUST00000057361 823 ntBASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn3Q8BHH8 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Clrn3Q8BHH8 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Clrn3Q8BHH8 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clrn3Q8BHH8 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clrn3Q8BHH8 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clrn3Q8BHH8 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clrn3Q8BHH8 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
Clrn3Q8BHH8 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clrn3Q8BHH8 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clrn3Q8BHH8 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Clrn3Q8BHH8 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clrn3Q8BHH8 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.22□□□□□ -0.29
Clrn3Q8BHH8 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Clrn3Q8BHH8 Gm43575-201ENSMUST00000196420 516 ntBASIC13.22□□□□□ -0.29
Clrn3Q8BHH8 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.22□□□□□ -0.29
Clrn3Q8BHH8 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clrn3Q8BHH8 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Clrn3Q8BHH8 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clrn3Q8BHH8 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Clrn3Q8BHH8 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clrn3Q8BHH8 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.22□□□□□ -0.29
Clrn3Q8BHH8 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clrn3Q8BHH8 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Clrn3Q8BHH8 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Clrn3Q8BHH8 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms