Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim50Q810I2 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim50Q810I2 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim50Q810I2 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim50Q810I2 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.71□□□□□ -0.21
Trim50Q810I2 Gm12428-201ENSMUST00000119844 727 ntBASIC13.71□□□□□ -0.21
Trim50Q810I2 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim50Q810I2 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.71□□□□□ -0.21
Trim50Q810I2 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim50Q810I2 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim50Q810I2 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim50Q810I2 Gm27622-201ENSMUST00000183779 60 ntBASIC13.71□□□□□ -0.21
Trim50Q810I2 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.71□□□□□ -0.21
Trim50Q810I2 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trim50Q810I2 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trim50Q810I2 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.71□□□□□ -0.21
Trim50Q810I2 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trim50Q810I2 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trim50Q810I2 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trim50Q810I2 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trim50Q810I2 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim50Q810I2 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim50Q810I2 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trim50Q810I2 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim50Q810I2 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim50Q810I2 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim50Q810I2 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trim50Q810I2 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Trim50Q810I2 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Trim50Q810I2 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim50Q810I2 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trim50Q810I2 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trim50Q810I2 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim50Q810I2 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim50Q810I2 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim50Q810I2 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim50Q810I2 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim50Q810I2 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trim50Q810I2 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trim50Q810I2 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trim50Q810I2 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim50Q810I2 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.7□□□□□ -0.22
Trim50Q810I2 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim50Q810I2 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim50Q810I2 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim50Q810I2 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim50Q810I2 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim50Q810I2 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim50Q810I2 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim50Q810I2 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim50Q810I2 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trim50Q810I2 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim50Q810I2 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trim50Q810I2 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim50Q810I2 Gm27430-201ENSMUST00000184585 107 ntBASIC13.7□□□□□ -0.22
Trim50Q810I2 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.7□□□□□ -0.22
Trim50Q810I2 Gm44333-201ENSMUST00000197168 107 ntBASIC13.7□□□□□ -0.22
Trim50Q810I2 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Trim50Q810I2 Gm44608-201ENSMUST00000206827 855 ntBASIC13.7□□□□□ -0.22
Trim50Q810I2 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.7□□□□□ -0.22
Trim50Q810I2 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.7□□□□□ -0.22
Trim50Q810I2 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.7□□□□□ -0.22
Trim50Q810I2 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim50Q810I2 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trim50Q810I2 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim50Q810I2 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim50Q810I2 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim50Q810I2 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim50Q810I2 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim50Q810I2 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim50Q810I2 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim50Q810I2 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim50Q810I2 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim50Q810I2 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim50Q810I2 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Trim50Q810I2 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim50Q810I2 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim50Q810I2 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.69□□□□□ -0.22
Trim50Q810I2 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim50Q810I2 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim50Q810I2 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim50Q810I2 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim50Q810I2 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Trim50Q810I2 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim50Q810I2 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trim50Q810I2 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim50Q810I2 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim50Q810I2 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim50Q810I2 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim50Q810I2 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.69□□□□□ -0.22
Trim50Q810I2 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Trim50Q810I2 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim50Q810I2 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim50Q810I2 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim50Q810I2 Gm27533-201ENSMUST00000183800 152 ntBASIC13.69□□□□□ -0.22
Trim50Q810I2 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.69□□□□□ -0.22
Trim50Q810I2 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim50Q810I2 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim50Q810I2 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim50Q810I2 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms