Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Ttc28Q80XJ3 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Ttc28Q80XJ3 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.73□□□□□ -0.53
Ttc28Q80XJ3 Nsd1-205ENSMUST00000224693 852 ntBASIC11.73□□□□□ -0.53
Ttc28Q80XJ3 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Ttc28Q80XJ3 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ttc28Q80XJ3 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ttc28Q80XJ3 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ttc28Q80XJ3 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC11.73□□□□□ -0.53
Ttc28Q80XJ3 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ttc28Q80XJ3 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.73□□□□□ -0.53
Ttc28Q80XJ3 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ttc28Q80XJ3 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ttc28Q80XJ3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ttc28Q80XJ3 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ttc28Q80XJ3 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ttc28Q80XJ3 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ttc28Q80XJ3 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Ttc28Q80XJ3 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Ttc28Q80XJ3 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Gm13342-201ENSMUST00000121055 207 ntBASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Gm13786-201ENSMUST00000122371 333 ntBASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Gm7029-201ENSMUST00000173226 450 ntBASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ttc28Q80XJ3 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ttc28Q80XJ3 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ttc28Q80XJ3 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ttc28Q80XJ3 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ttc28Q80XJ3 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.71□□□□□ -0.53
Ttc28Q80XJ3 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ttc28Q80XJ3 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ttc28Q80XJ3 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.71□□□□□ -0.53
Ttc28Q80XJ3 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.71□□□□□ -0.53
Ttc28Q80XJ3 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ttc28Q80XJ3 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ttc28Q80XJ3 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ttc28Q80XJ3 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ttc28Q80XJ3 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ttc28Q80XJ3 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ttc28Q80XJ3 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ttc28Q80XJ3 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ttc28Q80XJ3 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ttc28Q80XJ3 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Ttc28Q80XJ3 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.71□□□□□ -0.53
Ttc28Q80XJ3 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ttc28Q80XJ3 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.71□□□□□ -0.53
Ttc28Q80XJ3 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ttc28Q80XJ3 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ttc28Q80XJ3 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ttc28Q80XJ3 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ttc28Q80XJ3 Gm8810-201ENSMUST00000172895 754 ntBASIC11.71□□□□□ -0.53
Ttc28Q80XJ3 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.71□□□□□ -0.53
Ttc28Q80XJ3 Gm38223-201ENSMUST00000194484 695 ntBASIC11.71□□□□□ -0.53
Ttc28Q80XJ3 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ttc28Q80XJ3 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ttc28Q80XJ3 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ttc28Q80XJ3 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ttc28Q80XJ3 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ttc28Q80XJ3 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ttc28Q80XJ3 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ttc28Q80XJ3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms