Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ush1gQ80T11 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Ush1gQ80T11 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ush1gQ80T11 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ush1gQ80T11 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC15.36■□□□□ 0.05
Ush1gQ80T11 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ush1gQ80T11 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.36■□□□□ 0.05
Ush1gQ80T11 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.36■□□□□ 0.05
Ush1gQ80T11 AY702102-202ENSMUST00000194651 1173 ntBASIC15.36■□□□□ 0.05
Ush1gQ80T11 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC15.36■□□□□ 0.05
Ush1gQ80T11 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ush1gQ80T11 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.36■□□□□ 0.05
Ush1gQ80T11 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ush1gQ80T11 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ush1gQ80T11 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ush1gQ80T11 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Ush1gQ80T11 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ush1gQ80T11 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ush1gQ80T11 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ush1gQ80T11 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ush1gQ80T11 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Ush1gQ80T11 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ush1gQ80T11 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ush1gQ80T11 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ush1gQ80T11 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.35■□□□□ 0.05
Ush1gQ80T11 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ush1gQ80T11 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Ush1gQ80T11 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ush1gQ80T11 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ush1gQ80T11 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ush1gQ80T11 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ush1gQ80T11 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ush1gQ80T11 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ush1gQ80T11 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
Ush1gQ80T11 Gm12882-201ENSMUST00000121696 517 ntBASIC15.35■□□□□ 0.05
Ush1gQ80T11 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ush1gQ80T11 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Ush1gQ80T11 Gm28911-201ENSMUST00000188837 117 ntBASIC15.35■□□□□ 0.05
Ush1gQ80T11 Gm5035-201ENSMUST00000215581 927 ntBASIC15.35■□□□□ 0.05
Ush1gQ80T11 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC15.35■□□□□ 0.05
Ush1gQ80T11 AC238811.3-201ENSMUST00000225422 709 ntBASIC15.35■□□□□ 0.05
Ush1gQ80T11 AC159006.1-201ENSMUST00000226396 258 ntBASIC15.35■□□□□ 0.05
Ush1gQ80T11 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ush1gQ80T11 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ush1gQ80T11 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ush1gQ80T11 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ush1gQ80T11 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ush1gQ80T11 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ush1gQ80T11 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ush1gQ80T11 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ush1gQ80T11 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ush1gQ80T11 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.35■□□□□ 0.05
Ush1gQ80T11 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.35■□□□□ 0.05
Ush1gQ80T11 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ush1gQ80T11 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ush1gQ80T11 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.34■□□□□ 0.05
Ush1gQ80T11 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ush1gQ80T11 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ush1gQ80T11 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ush1gQ80T11 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ush1gQ80T11 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ush1gQ80T11 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ush1gQ80T11 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ush1gQ80T11 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.33■□□□□ 0.04
Ush1gQ80T11 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms