Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf38bQ80SY5 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Prpf38bQ80SY5 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf38bQ80SY5 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf38bQ80SY5 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf38bQ80SY5 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf38bQ80SY5 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.71□□□□□ -0.05
Prpf38bQ80SY5 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf38bQ80SY5 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf38bQ80SY5 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf38bQ80SY5 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.71□□□□□ -0.05
Prpf38bQ80SY5 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.71□□□□□ -0.05
Prpf38bQ80SY5 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.71□□□□□ -0.05
Prpf38bQ80SY5 Gm9522-201ENSMUST00000182394 926 ntBASIC14.71□□□□□ -0.05
Prpf38bQ80SY5 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.71□□□□□ -0.05
Prpf38bQ80SY5 AC154319.1-201ENSMUST00000216330 312 ntBASIC14.71□□□□□ -0.05
Prpf38bQ80SY5 Gm46209-201ENSMUST00000217912 553 ntBASIC14.71□□□□□ -0.05
Prpf38bQ80SY5 AL589735.1-201ENSMUST00000224353 270 ntBASIC14.71□□□□□ -0.05
Prpf38bQ80SY5 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf38bQ80SY5 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.71□□□□□ -0.05
Prpf38bQ80SY5 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf38bQ80SY5 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.71□□□□□ -0.05
Prpf38bQ80SY5 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf38bQ80SY5 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf38bQ80SY5 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.71□□□□□ -0.05
Prpf38bQ80SY5 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.71□□□□□ -0.05
Prpf38bQ80SY5 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf38bQ80SY5 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Prpf38bQ80SY5 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.06
Prpf38bQ80SY5 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Prpf38bQ80SY5 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Prpf38bQ80SY5 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Prpf38bQ80SY5 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Prpf38bQ80SY5 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Prpf38bQ80SY5 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.71□□□□□ -0.06
Prpf38bQ80SY5 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Prpf38bQ80SY5 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Prpf38bQ80SY5 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Prpf38bQ80SY5 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38bQ80SY5 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38bQ80SY5 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38bQ80SY5 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38bQ80SY5 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38bQ80SY5 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38bQ80SY5 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38bQ80SY5 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38bQ80SY5 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Prpf38bQ80SY5 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38bQ80SY5 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38bQ80SY5 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.7□□□□□ -0.06
Prpf38bQ80SY5 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38bQ80SY5 Gm21854-201ENSMUST00000179901 471 ntBASIC14.7□□□□□ -0.06
Prpf38bQ80SY5 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38bQ80SY5 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38bQ80SY5 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.7□□□□□ -0.06
Prpf38bQ80SY5 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.7□□□□□ -0.06
Prpf38bQ80SY5 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38bQ80SY5 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Prpf38bQ80SY5 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.7□□□□□ -0.06
Prpf38bQ80SY5 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38bQ80SY5 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38bQ80SY5 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38bQ80SY5 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.7□□□□□ -0.06
Prpf38bQ80SY5 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.7□□□□□ -0.06
Prpf38bQ80SY5 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38bQ80SY5 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38bQ80SY5 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.7□□□□□ -0.06
Prpf38bQ80SY5 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.7□□□□□ -0.06
Prpf38bQ80SY5 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38bQ80SY5 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38bQ80SY5 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38bQ80SY5 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf38bQ80SY5 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prpf38bQ80SY5 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms