Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh8Q7TSK3 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.87□□□□□ -0.19
Pcdh8Q7TSK3 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh8Q7TSK3 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh8Q7TSK3 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Pcdh8Q7TSK3 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh8Q7TSK3 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh8Q7TSK3 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Pcdh8Q7TSK3 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Pcdh8Q7TSK3 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh8Q7TSK3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh8Q7TSK3 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh8Q7TSK3 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh8Q7TSK3 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdh8Q7TSK3 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh8Q7TSK3 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh8Q7TSK3 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Pcdh8Q7TSK3 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh8Q7TSK3 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh8Q7TSK3 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Pcdh8Q7TSK3 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdh8Q7TSK3 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.86□□□□□ -0.19
Pcdh8Q7TSK3 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh8Q7TSK3 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh8Q7TSK3 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh8Q7TSK3 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdh8Q7TSK3 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdh8Q7TSK3 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.86□□□□□ -0.19
Pcdh8Q7TSK3 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh8Q7TSK3 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.86□□□□□ -0.19
Pcdh8Q7TSK3 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.86□□□□□ -0.19
Pcdh8Q7TSK3 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdh8Q7TSK3 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdh8Q7TSK3 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.86□□□□□ -0.19
Pcdh8Q7TSK3 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh8Q7TSK3 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Pcdh8Q7TSK3 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh8Q7TSK3 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh8Q7TSK3 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Pcdh8Q7TSK3 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh8Q7TSK3 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh8Q7TSK3 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh8Q7TSK3 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.86□□□□□ -0.19
Pcdh8Q7TSK3 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh8Q7TSK3 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh8Q7TSK3 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh8Q7TSK3 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh8Q7TSK3 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Gm12490-201ENSMUST00000120255 560 ntBASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Gm12882-201ENSMUST00000121696 517 ntBASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Gm23984-201ENSMUST00000157139 203 ntBASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Gm6745-201ENSMUST00000199216 526 ntBASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Pcdh8Q7TSK3 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh8Q7TSK3 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh8Q7TSK3 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdh8Q7TSK3 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh8Q7TSK3 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh8Q7TSK3 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms