Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.44□□□□□ -0.58
Vma21Q78T54 Gm43332-201ENSMUST00000202511 1044 ntBASIC11.44□□□□□ -0.58
Vma21Q78T54 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Vma21Q78T54 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC11.44□□□□□ -0.58
Vma21Q78T54 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.44□□□□□ -0.58
Vma21Q78T54 Psmb5-202ENSMUST00000227257 622 ntBASIC11.44□□□□□ -0.58
Vma21Q78T54 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.44□□□□□ -0.58
Vma21Q78T54 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vma21Q78T54 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vma21Q78T54 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.44□□□□□ -0.58
Vma21Q78T54 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Vma21Q78T54 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vma21Q78T54 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vma21Q78T54 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vma21Q78T54 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Vma21Q78T54 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.44□□□□□ -0.58
Vma21Q78T54 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.44□□□□□ -0.58
Vma21Q78T54 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vma21Q78T54 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Vma21Q78T54 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vma21Q78T54 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.44□□□□□ -0.58
Vma21Q78T54 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.43□□□□□ -0.58
Vma21Q78T54 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vma21Q78T54 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vma21Q78T54 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Vma21Q78T54 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Vma21Q78T54 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vma21Q78T54 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Vma21Q78T54 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vma21Q78T54 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vma21Q78T54 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vma21Q78T54 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vma21Q78T54 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vma21Q78T54 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vma21Q78T54 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC11.43□□□□□ -0.58
Vma21Q78T54 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.43□□□□□ -0.58
Vma21Q78T54 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vma21Q78T54 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC11.43□□□□□ -0.58
Vma21Q78T54 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vma21Q78T54 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC11.43□□□□□ -0.58
Vma21Q78T54 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC11.43□□□□□ -0.58
Vma21Q78T54 AC174742.1-201ENSMUST00000218272 304 ntBASIC11.43□□□□□ -0.58
Vma21Q78T54 Mzt1-203ENSMUST00000227948 952 ntBASIC11.43□□□□□ -0.58
Vma21Q78T54 Gm7461-201ENSMUST00000058918 827 ntBASIC11.43□□□□□ -0.58
Vma21Q78T54 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Vma21Q78T54 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vma21Q78T54 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Vma21Q78T54 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Vma21Q78T54 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vma21Q78T54 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vma21Q78T54 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Vma21Q78T54 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.43□□□□□ -0.58
Vma21Q78T54 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC11.43□□□□□ -0.58
Vma21Q78T54 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vma21Q78T54 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC11.43□□□□□ -0.58
Vma21Q78T54 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vma21Q78T54 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vma21Q78T54 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Vma21Q78T54 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Vma21Q78T54 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vma21Q78T54 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vma21Q78T54 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vma21Q78T54 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vma21Q78T54 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vma21Q78T54 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vma21Q78T54 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vma21Q78T54 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vma21Q78T54 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vma21Q78T54 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vma21Q78T54 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vma21Q78T54 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC11.42□□□□□ -0.58
Vma21Q78T54 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC11.42□□□□□ -0.58
Vma21Q78T54 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC11.42□□□□□ -0.58
Vma21Q78T54 Gm18737-201ENSMUST00000173594 937 ntBASIC11.42□□□□□ -0.58
Vma21Q78T54 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC11.42□□□□□ -0.58
Vma21Q78T54 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC11.42□□□□□ -0.58
Vma21Q78T54 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vma21Q78T54 Gm17968-201ENSMUST00000194902 784 ntBASIC11.42□□□□□ -0.58
Vma21Q78T54 Gm44492-201ENSMUST00000197012 141 ntBASIC11.42□□□□□ -0.58
Vma21Q78T54 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vma21Q78T54 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vma21Q78T54 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vma21Q78T54 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vma21Q78T54 CT030684.1-201ENSMUST00000227292 914 ntBASIC11.42□□□□□ -0.58
Vma21Q78T54 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vma21Q78T54 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vma21Q78T54 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC11.42□□□□□ -0.58
Vma21Q78T54 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.42□□□□□ -0.58
Vma21Q78T54 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vma21Q78T54 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vma21Q78T54 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vma21Q78T54 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Vma21Q78T54 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Vma21Q78T54 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Vma21Q78T54 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vma21Q78T54 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vma21Q78T54 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Vma21Q78T54 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vma21Q78T54 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vma21Q78T54 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms