Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Syne1Q6ZWR6 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Syne1Q6ZWR6 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Syne1Q6ZWR6 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Syne1Q6ZWR6 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Syne1Q6ZWR6 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC4.78□□□□□ -1.64
Syne1Q6ZWR6 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Syne1Q6ZWR6 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Syne1Q6ZWR6 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC4.78□□□□□ -1.64
Syne1Q6ZWR6 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
Syne1Q6ZWR6 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Syne1Q6ZWR6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Gm15460-201ENSMUST00000118147 391 ntBASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Gm8242-201ENSMUST00000193029 1420 ntBASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Gm22018-201ENSMUST00000104357 131 ntBASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 AC156016.3-201ENSMUST00000228623 344 ntBASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Gm12742-201ENSMUST00000117326 410 ntBASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Gm21470-201ENSMUST00000187680 696 ntBASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Gm5049-201ENSMUST00000195878 1590 ntBASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Gm45133-201ENSMUST00000207548 2773 ntBASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 AC121804.3-201ENSMUST00000223420 295 ntBASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 AC154806.6-201ENSMUST00000228192 202 ntBASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Syne1Q6ZWR6 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms