Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scaf4Q6PFF0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.86□□□□□ -0.19
Scaf4Q6PFF0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.86□□□□□ -0.19
Scaf4Q6PFF0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.86□□□□□ -0.19
Scaf4Q6PFF0 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Scaf4Q6PFF0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.86□□□□□ -0.19
Scaf4Q6PFF0 Mir8098-201ENSMUST00000184011 137 ntBASIC13.86□□□□□ -0.19
Scaf4Q6PFF0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.86□□□□□ -0.19
Scaf4Q6PFF0 Gm21362-201ENSMUST00000194272 928 ntBASIC13.86□□□□□ -0.19
Scaf4Q6PFF0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Scaf4Q6PFF0 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scaf4Q6PFF0 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scaf4Q6PFF0 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Scaf4Q6PFF0 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scaf4Q6PFF0 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Scaf4Q6PFF0 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scaf4Q6PFF0 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Scaf4Q6PFF0 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scaf4Q6PFF0 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scaf4Q6PFF0 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scaf4Q6PFF0 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scaf4Q6PFF0 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Scaf4Q6PFF0 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Mir5131-201ENSMUST00000175426 93 ntBASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Gm5864-201ENSMUST00000202263 970 ntBASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Gm44487-201ENSMUST00000205145 325 ntBASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scaf4Q6PFF0 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Gm13884-201ENSMUST00000118103 829 ntBASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Gm17968-201ENSMUST00000194902 784 ntBASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scaf4Q6PFF0 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms