Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.29■□□□□ 0.2
Nup98Q6PFD9 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup98Q6PFD9 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup98Q6PFD9 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nup98Q6PFD9 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Nup98Q6PFD9 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC16.29■□□□□ 0.2
Nup98Q6PFD9 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC16.29■□□□□ 0.2
Nup98Q6PFD9 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup98Q6PFD9 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nup98Q6PFD9 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nup98Q6PFD9 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
Nup98Q6PFD9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup98Q6PFD9 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC16.28■□□□□ 0.2
Nup98Q6PFD9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup98Q6PFD9 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Nup98Q6PFD9 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nup98Q6PFD9 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup98Q6PFD9 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nup98Q6PFD9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup98Q6PFD9 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16.28■□□□□ 0.2
Nup98Q6PFD9 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Nup98Q6PFD9 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup98Q6PFD9 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup98Q6PFD9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.28■□□□□ 0.2
Nup98Q6PFD9 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup98Q6PFD9 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup98Q6PFD9 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Nup98Q6PFD9 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup98Q6PFD9 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup98Q6PFD9 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Nup98Q6PFD9 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nup98Q6PFD9 Gm27682-201ENSMUST00000183930 110 ntBASIC16.28■□□□□ 0.2
Nup98Q6PFD9 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC16.28■□□□□ 0.2
Nup98Q6PFD9 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup98Q6PFD9 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup98Q6PFD9 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup98Q6PFD9 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nup98Q6PFD9 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nup98Q6PFD9 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup98Q6PFD9 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nup98Q6PFD9 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nup98Q6PFD9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nup98Q6PFD9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.27■□□□□ 0.2
Nup98Q6PFD9 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nup98Q6PFD9 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nup98Q6PFD9 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nup98Q6PFD9 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nup98Q6PFD9 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Nup98Q6PFD9 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC16.27■□□□□ 0.2
Nup98Q6PFD9 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nup98Q6PFD9 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nup98Q6PFD9 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Nup98Q6PFD9 Gm29649-201ENSMUST00000185649 419 ntBASIC16.27■□□□□ 0.2
Nup98Q6PFD9 Gm43133-201ENSMUST00000197472 463 ntBASIC16.27■□□□□ 0.2
Nup98Q6PFD9 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Nup98Q6PFD9 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nup98Q6PFD9 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nup98Q6PFD9 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nup98Q6PFD9 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nup98Q6PFD9 Gm9823-201ENSMUST00000051212 327 ntBASIC16.27■□□□□ 0.2
Nup98Q6PFD9 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nup98Q6PFD9 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Nup98Q6PFD9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Nup98Q6PFD9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nup98Q6PFD9 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Nup98Q6PFD9 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nup98Q6PFD9 Gm42853-201ENSMUST00000201273 1387 ntBASIC16.27■□□□□ 0.19
Nup98Q6PFD9 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nup98Q6PFD9 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nup98Q6PFD9 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nup98Q6PFD9 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC16.26■□□□□ 0.19
Nup98Q6PFD9 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nup98Q6PFD9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nup98Q6PFD9 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nup98Q6PFD9 Gm8565-201ENSMUST00000183259 1014 ntBASIC16.26■□□□□ 0.19
Nup98Q6PFD9 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Nup98Q6PFD9 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC16.26■□□□□ 0.19
Nup98Q6PFD9 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nup98Q6PFD9 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Nup98Q6PFD9 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Nup98Q6PFD9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nup98Q6PFD9 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Nup98Q6PFD9 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nup98Q6PFD9 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nup98Q6PFD9 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nup98Q6PFD9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nup98Q6PFD9 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC16.26■□□□□ 0.19
Nup98Q6PFD9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Nup98Q6PFD9 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Nup98Q6PFD9 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC16.26■□□□□ 0.19
Nup98Q6PFD9 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nup98Q6PFD9 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nup98Q6PFD9 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nup98Q6PFD9 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC16.26■□□□□ 0.19
Nup98Q6PFD9 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC16.26■□□□□ 0.19
Nup98Q6PFD9 Gm26927-201ENSMUST00000182385 965 ntBASIC16.26■□□□□ 0.19
Nup98Q6PFD9 Mir6420-201ENSMUST00000185032 102 ntBASIC16.26■□□□□ 0.19
Nup98Q6PFD9 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC16.26■□□□□ 0.19
Nup98Q6PFD9 CT573086.1-201ENSMUST00000227202 1074 ntBASIC16.26■□□□□ 0.19
Nup98Q6PFD9 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms