Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Sp140Q6NSQ5 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Sp140Q6NSQ5 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sp140Q6NSQ5 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sp140Q6NSQ5 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sp140Q6NSQ5 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Sp140Q6NSQ5 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sp140Q6NSQ5 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sp140Q6NSQ5 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sp140Q6NSQ5 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sp140Q6NSQ5 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Sp140Q6NSQ5 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sp140Q6NSQ5 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Sp140Q6NSQ5 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.27□□□□□ -0.13
Sp140Q6NSQ5 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Sp140Q6NSQ5 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sp140Q6NSQ5 AA619741-201ENSMUST00000195095 646 ntBASIC14.27□□□□□ -0.13
Sp140Q6NSQ5 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.27□□□□□ -0.13
Sp140Q6NSQ5 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Sp140Q6NSQ5 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sp140Q6NSQ5 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Sp140Q6NSQ5 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sp140Q6NSQ5 Mir125a-201ENSMUST00000083545 68 ntBASIC14.27□□□□□ -0.13
Sp140Q6NSQ5 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Sp140Q6NSQ5 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.27□□□□□ -0.13
Sp140Q6NSQ5 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sp140Q6NSQ5 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sp140Q6NSQ5 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sp140Q6NSQ5 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.27□□□□□ -0.13
Sp140Q6NSQ5 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sp140Q6NSQ5 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sp140Q6NSQ5 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sp140Q6NSQ5 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sp140Q6NSQ5 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sp140Q6NSQ5 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 Gm9719-201ENSMUST00000162765 543 ntBASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 Gm2213-201ENSMUST00000197485 688 ntBASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 Gm44608-201ENSMUST00000206827 855 ntBASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 Gm5779-201ENSMUST00000218467 910 ntBASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Sp140Q6NSQ5 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 Gm5566-201ENSMUST00000116118 459 ntBASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 Gm24158-201ENSMUST00000175263 71 ntBASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 Gm27702-201ENSMUST00000184512 56 ntBASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.25□□□□□ -0.13
Sp140Q6NSQ5 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms