Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Krt39Q6IFX4 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Krt39Q6IFX4 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.53■□□□□ 0.08
Krt39Q6IFX4 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.53■□□□□ 0.08
Krt39Q6IFX4 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.53■□□□□ 0.08
Krt39Q6IFX4 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.53■□□□□ 0.08
Krt39Q6IFX4 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.53■□□□□ 0.08
Krt39Q6IFX4 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.53■□□□□ 0.08
Krt39Q6IFX4 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.53■□□□□ 0.08
Krt39Q6IFX4 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Krt39Q6IFX4 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.53■□□□□ 0.08
Krt39Q6IFX4 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.53■□□□□ 0.08
Krt39Q6IFX4 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.53■□□□□ 0.08
Krt39Q6IFX4 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Krt39Q6IFX4 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Krt39Q6IFX4 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Krt39Q6IFX4 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Krt39Q6IFX4 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Krt39Q6IFX4 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Krt39Q6IFX4 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Krt39Q6IFX4 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Krt39Q6IFX4 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Krt39Q6IFX4 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.53■□□□□ 0.08
Krt39Q6IFX4 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.53■□□□□ 0.08
Krt39Q6IFX4 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Krt39Q6IFX4 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Krt39Q6IFX4 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Krt39Q6IFX4 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Krt39Q6IFX4 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.52■□□□□ 0.08
Krt39Q6IFX4 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Krt39Q6IFX4 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Krt39Q6IFX4 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
Krt39Q6IFX4 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.52■□□□□ 0.08
Krt39Q6IFX4 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.52■□□□□ 0.08
Krt39Q6IFX4 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Krt39Q6IFX4 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.52■□□□□ 0.08
Krt39Q6IFX4 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Krt39Q6IFX4 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Krt39Q6IFX4 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.52■□□□□ 0.08
Krt39Q6IFX4 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Krt39Q6IFX4 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Krt39Q6IFX4 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Krt39Q6IFX4 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.52■□□□□ 0.08
Krt39Q6IFX4 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Krt39Q6IFX4 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Krt39Q6IFX4 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Krt39Q6IFX4 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Krt39Q6IFX4 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Krt39Q6IFX4 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Krt39Q6IFX4 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Krt39Q6IFX4 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Krt39Q6IFX4 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Krt39Q6IFX4 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Krt39Q6IFX4 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Krt39Q6IFX4 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Krt39Q6IFX4 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Krt39Q6IFX4 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Krt39Q6IFX4 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Krt39Q6IFX4 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Krt39Q6IFX4 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.51■□□□□ 0.07
Krt39Q6IFX4 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Krt39Q6IFX4 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Krt39Q6IFX4 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Krt39Q6IFX4 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Krt39Q6IFX4 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Krt39Q6IFX4 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Krt39Q6IFX4 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Krt39Q6IFX4 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Krt39Q6IFX4 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.51■□□□□ 0.07
Krt39Q6IFX4 Gm11543-201ENSMUST00000120758 370 ntBASIC15.51■□□□□ 0.07
Krt39Q6IFX4 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.51■□□□□ 0.07
Krt39Q6IFX4 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Krt39Q6IFX4 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Krt39Q6IFX4 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Krt39Q6IFX4 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Krt39Q6IFX4 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.51■□□□□ 0.07
Krt39Q6IFX4 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.51■□□□□ 0.07
Krt39Q6IFX4 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Krt39Q6IFX4 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Krt39Q6IFX4 AC154262.2-201ENSMUST00000224310 2293 ntBASIC15.51■□□□□ 0.07
Krt39Q6IFX4 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Krt39Q6IFX4 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Krt39Q6IFX4 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Krt39Q6IFX4 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Krt39Q6IFX4 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Krt39Q6IFX4 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Krt39Q6IFX4 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.51■□□□□ 0.07
Krt39Q6IFX4 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Krt39Q6IFX4 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Krt39Q6IFX4 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Krt39Q6IFX4 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Krt39Q6IFX4 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Krt39Q6IFX4 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Krt39Q6IFX4 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Krt39Q6IFX4 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Krt39Q6IFX4 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.5■□□□□ 0.07
Krt39Q6IFX4 Gm4995-201ENSMUST00000117247 432 ntBASIC15.5■□□□□ 0.07
Krt39Q6IFX4 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.5■□□□□ 0.07
Krt39Q6IFX4 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.5■□□□□ 0.07
Krt39Q6IFX4 Gm24513-201ENSMUST00000174964 138 ntBASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms