Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC17.75■□□□□ 0.43
Clcn1Q64347 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn1Q64347 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Clcn1Q64347 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC17.75■□□□□ 0.43
Clcn1Q64347 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Clcn1Q64347 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn1Q64347 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn1Q64347 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn1Q64347 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Clcn1Q64347 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn1Q64347 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn1Q64347 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.75■□□□□ 0.43
Clcn1Q64347 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.75■□□□□ 0.43
Clcn1Q64347 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn1Q64347 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn1Q64347 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn1Q64347 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn1Q64347 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn1Q64347 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn1Q64347 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.74■□□□□ 0.43
Clcn1Q64347 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Clcn1Q64347 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn1Q64347 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn1Q64347 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Clcn1Q64347 Mir1894-201ENSMUST00000122802 81 ntBASIC17.74■□□□□ 0.43
Clcn1Q64347 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC17.74■□□□□ 0.43
Clcn1Q64347 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
Clcn1Q64347 Gm8652-201ENSMUST00000181363 964 ntBASIC17.74■□□□□ 0.43
Clcn1Q64347 Ighv8-14-201ENSMUST00000196781 358 ntBASIC17.74■□□□□ 0.43
Clcn1Q64347 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC17.74■□□□□ 0.43
Clcn1Q64347 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC17.74■□□□□ 0.43
Clcn1Q64347 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Clcn1Q64347 AC155258.1-201ENSMUST00000219303 253 ntBASIC17.74■□□□□ 0.43
Clcn1Q64347 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn1Q64347 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn1Q64347 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn1Q64347 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn1Q64347 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn1Q64347 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn1Q64347 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Clcn1Q64347 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn1Q64347 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn1Q64347 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn1Q64347 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn1Q64347 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Clcn1Q64347 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn1Q64347 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn1Q64347 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Clcn1Q64347 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Clcn1Q64347 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Clcn1Q64347 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn1Q64347 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Clcn1Q64347 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC17.73■□□□□ 0.43
Clcn1Q64347 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Clcn1Q64347 Gm12742-201ENSMUST00000117326 410 ntBASIC17.73■□□□□ 0.43
Clcn1Q64347 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn1Q64347 Gm13689-201ENSMUST00000119360 685 ntBASIC17.73■□□□□ 0.43
Clcn1Q64347 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn1Q64347 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn1Q64347 Gm45691-201ENSMUST00000206905 1120 ntBASIC17.73■□□□□ 0.43
Clcn1Q64347 Gm8463-201ENSMUST00000208573 613 ntBASIC17.73■□□□□ 0.43
Clcn1Q64347 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn1Q64347 AC073947.1-201ENSMUST00000216991 649 ntBASIC17.73■□□□□ 0.43
Clcn1Q64347 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn1Q64347 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn1Q64347 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn1Q64347 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn1Q64347 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn1Q64347 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn1Q64347 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn1Q64347 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn1Q64347 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn1Q64347 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn1Q64347 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC17.73■□□□□ 0.43
Clcn1Q64347 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn1Q64347 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn1Q64347 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn1Q64347 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC17.73■□□□□ 0.43
Clcn1Q64347 Gm8775-201ENSMUST00000170943 1327 ntBASIC17.72■□□□□ 0.43
Clcn1Q64347 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Clcn1Q64347 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn1Q64347 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn1Q64347 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn1Q64347 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn1Q64347 Gm4081-201ENSMUST00000195287 1838 ntBASIC17.72■□□□□ 0.43
Clcn1Q64347 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn1Q64347 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Clcn1Q64347 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn1Q64347 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Clcn1Q64347 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn1Q64347 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn1Q64347 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Clcn1Q64347 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn1Q64347 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn1Q64347 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn1Q64347 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC17.72■□□□□ 0.43
Clcn1Q64347 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn1Q64347 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Clcn1Q64347 Gm11434-201ENSMUST00000122379 629 ntBASIC17.72■□□□□ 0.43
Clcn1Q64347 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms