Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ctr9Q62018 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ctr9Q62018 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.56■□□□□ 0.24
Ctr9Q62018 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ctr9Q62018 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ctr9Q62018 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC16.56■□□□□ 0.24
Ctr9Q62018 Gm12134-201ENSMUST00000122109 520 ntBASIC16.56■□□□□ 0.24
Ctr9Q62018 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ctr9Q62018 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC16.56■□□□□ 0.24
Ctr9Q62018 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.56■□□□□ 0.24
Ctr9Q62018 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ctr9Q62018 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Ctr9Q62018 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ctr9Q62018 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ctr9Q62018 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ctr9Q62018 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ctr9Q62018 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.56■□□□□ 0.24
Ctr9Q62018 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ctr9Q62018 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ctr9Q62018 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ctr9Q62018 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ctr9Q62018 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ctr9Q62018 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ctr9Q62018 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.56■□□□□ 0.24
Ctr9Q62018 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ctr9Q62018 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ctr9Q62018 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Ctr9Q62018 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ctr9Q62018 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ctr9Q62018 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ctr9Q62018 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ctr9Q62018 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ctr9Q62018 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ctr9Q62018 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ctr9Q62018 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ctr9Q62018 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ctr9Q62018 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ctr9Q62018 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ctr9Q62018 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ctr9Q62018 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ctr9Q62018 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Ctr9Q62018 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ctr9Q62018 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ctr9Q62018 Gm28760-201ENSMUST00000185995 736 ntBASIC16.55■□□□□ 0.24
Ctr9Q62018 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC16.55■□□□□ 0.24
Ctr9Q62018 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.55■□□□□ 0.24
Ctr9Q62018 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ctr9Q62018 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.55■□□□□ 0.24
Ctr9Q62018 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ctr9Q62018 Gm18027-201ENSMUST00000218947 619 ntBASIC16.55■□□□□ 0.24
Ctr9Q62018 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ctr9Q62018 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ctr9Q62018 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ctr9Q62018 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ctr9Q62018 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ctr9Q62018 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ctr9Q62018 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ctr9Q62018 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ctr9Q62018 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Ctr9Q62018 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ctr9Q62018 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Ctr9Q62018 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ctr9Q62018 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ctr9Q62018 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.55■□□□□ 0.24
Ctr9Q62018 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ctr9Q62018 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ctr9Q62018 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ctr9Q62018 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ctr9Q62018 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.54■□□□□ 0.24
Ctr9Q62018 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ctr9Q62018 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ctr9Q62018 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ctr9Q62018 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ctr9Q62018 Gm4804-201ENSMUST00000182234 999 ntBASIC16.54■□□□□ 0.24
Ctr9Q62018 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.54■□□□□ 0.24
Ctr9Q62018 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC16.54■□□□□ 0.24
Ctr9Q62018 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.54■□□□□ 0.24
Ctr9Q62018 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ctr9Q62018 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ctr9Q62018 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ctr9Q62018 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.54■□□□□ 0.24
Ctr9Q62018 Gm14452-201ENSMUST00000118680 1632 ntBASIC16.54■□□□□ 0.24
Ctr9Q62018 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ctr9Q62018 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.54■□□□□ 0.24
Ctr9Q62018 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ctr9Q62018 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ctr9Q62018 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ctr9Q62018 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Ctr9Q62018 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ctr9Q62018 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ctr9Q62018 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ctr9Q62018 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ctr9Q62018 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ctr9Q62018 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ctr9Q62018 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ctr9Q62018 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ctr9Q62018 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ctr9Q62018 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ctr9Q62018 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ctr9Q62018 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms