Protein–RNA interactions for Protein: Q61510

Trim25, E3 ubiquitin/ISG15 ligase TRIM25, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim25Q61510 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim25Q61510 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim25Q61510 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.21■□□□□ 0.03
Trim25Q61510 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.21■□□□□ 0.03
Trim25Q61510 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.21■□□□□ 0.03
Trim25Q61510 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim25Q61510 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.21■□□□□ 0.03
Trim25Q61510 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.21■□□□□ 0.03
Trim25Q61510 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.21■□□□□ 0.03
Trim25Q61510 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim25Q61510 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim25Q61510 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim25Q61510 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim25Q61510 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim25Q61510 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim25Q61510 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trim25Q61510 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trim25Q61510 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim25Q61510 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim25Q61510 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim25Q61510 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim25Q61510 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim25Q61510 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim25Q61510 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim25Q61510 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim25Q61510 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim25Q61510 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim25Q61510 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim25Q61510 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trim25Q61510 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim25Q61510 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim25Q61510 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim25Q61510 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trim25Q61510 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim25Q61510 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim25Q61510 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.2■□□□□ 0.02
Trim25Q61510 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim25Q61510 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim25Q61510 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim25Q61510 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim25Q61510 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.2■□□□□ 0.02
Trim25Q61510 Gm27357-201ENSMUST00000183754 135 ntBASIC15.2■□□□□ 0.02
Trim25Q61510 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim25Q61510 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim25Q61510 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.2■□□□□ 0.02
Trim25Q61510 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim25Q61510 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim25Q61510 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim25Q61510 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim25Q61510 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trim25Q61510 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Trim25Q61510 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Trim25Q61510 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim25Q61510 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trim25Q61510 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trim25Q61510 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim25Q61510 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.19■□□□□ 0.02
Trim25Q61510 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim25Q61510 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim25Q61510 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim25Q61510 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim25Q61510 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim25Q61510 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim25Q61510 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim25Q61510 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim25Q61510 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trim25Q61510 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trim25Q61510 Gm7284-201ENSMUST00000131667 944 ntBASIC15.19■□□□□ 0.02
Trim25Q61510 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.19■□□□□ 0.02
Trim25Q61510 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.19■□□□□ 0.02
Trim25Q61510 Gm6089-201ENSMUST00000197666 938 ntBASIC15.19■□□□□ 0.02
Trim25Q61510 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.19■□□□□ 0.02
Trim25Q61510 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim25Q61510 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.19■□□□□ 0.02
Trim25Q61510 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim25Q61510 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim25Q61510 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim25Q61510 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trim25Q61510 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim25Q61510 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim25Q61510 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim25Q61510 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim25Q61510 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trim25Q61510 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim25Q61510 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim25Q61510 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim25Q61510 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim25Q61510 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim25Q61510 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim25Q61510 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim25Q61510 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim25Q61510 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim25Q61510 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim25Q61510 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.18■□□□□ 0.02
Trim25Q61510 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim25Q61510 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim25Q61510 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Trim25Q61510 Ntrk2-204ENSMUST00000224259 3049 ntBASIC15.18■□□□□ 0.02
Trim25Q61510 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim25Q61510 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms