Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ccne1Q61457 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC18.17■□□□□ 0.5
Ccne1Q61457 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccne1Q61457 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccne1Q61457 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccne1Q61457 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Ccne1Q61457 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccne1Q61457 Mir698-201ENSMUST00000102164 109 ntBASIC18.17■□□□□ 0.5
Ccne1Q61457 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC18.17■□□□□ 0.5
Ccne1Q61457 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC18.17■□□□□ 0.5
Ccne1Q61457 Gm24196-201ENSMUST00000179161 110 ntBASIC18.17■□□□□ 0.5
Ccne1Q61457 Gm37424-201ENSMUST00000191727 561 ntBASIC18.17■□□□□ 0.5
Ccne1Q61457 Gm38223-201ENSMUST00000194484 695 ntBASIC18.17■□□□□ 0.5
Ccne1Q61457 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Ccne1Q61457 AC166997.1-201ENSMUST00000225122 572 ntBASIC18.17■□□□□ 0.5
Ccne1Q61457 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccne1Q61457 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccne1Q61457 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccne1Q61457 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccne1Q61457 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccne1Q61457 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccne1Q61457 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccne1Q61457 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccne1Q61457 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccne1Q61457 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccne1Q61457 Gm43598-201ENSMUST00000202482 2479 ntBASIC18.16■□□□□ 0.5
Ccne1Q61457 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ccne1Q61457 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Ccne1Q61457 AC162938.1-201ENSMUST00000213140 2323 ntBASIC18.16■□□□□ 0.5
Ccne1Q61457 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Ccne1Q61457 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccne1Q61457 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Ccne1Q61457 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccne1Q61457 Snora78-201ENSMUST00000158630 128 ntBASIC18.16■□□□□ 0.5
Ccne1Q61457 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC18.16■□□□□ 0.5
Ccne1Q61457 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccne1Q61457 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccne1Q61457 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Ccne1Q61457 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ccne1Q61457 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccne1Q61457 Gm13050-201ENSMUST00000122149 1345 ntBASIC18.16■□□□□ 0.5
Ccne1Q61457 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC18.16■□□□□ 0.5
Ccne1Q61457 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccne1Q61457 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccne1Q61457 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccne1Q61457 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccne1Q61457 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccne1Q61457 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccne1Q61457 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccne1Q61457 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccne1Q61457 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccne1Q61457 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccne1Q61457 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.15■□□□□ 0.5
Ccne1Q61457 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccne1Q61457 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ccne1Q61457 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccne1Q61457 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccne1Q61457 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ccne1Q61457 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccne1Q61457 Gm15371-201ENSMUST00000117057 784 ntBASIC18.15■□□□□ 0.5
Ccne1Q61457 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
Ccne1Q61457 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Ccne1Q61457 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccne1Q61457 Gm3809-201ENSMUST00000180973 1006 ntBASIC18.15■□□□□ 0.5
Ccne1Q61457 Gm29649-201ENSMUST00000185649 419 ntBASIC18.15■□□□□ 0.5
Ccne1Q61457 Gm42442-201ENSMUST00000197951 1133 ntBASIC18.15■□□□□ 0.5
Ccne1Q61457 Gm9299-201ENSMUST00000206392 1140 ntBASIC18.15■□□□□ 0.5
Ccne1Q61457 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
Ccne1Q61457 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ccne1Q61457 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccne1Q61457 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ccne1Q61457 Gm44981-201ENSMUST00000205549 1943 ntBASIC18.15■□□□□ 0.5
Ccne1Q61457 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccne1Q61457 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccne1Q61457 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Ccne1Q61457 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC18.14■□□□□ 0.5
Ccne1Q61457 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ccne1Q61457 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Ccne1Q61457 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ccne1Q61457 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ccne1Q61457 Ankra2-208ENSMUST00000226100 1476 ntBASIC18.14■□□□□ 0.5
Ccne1Q61457 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccne1Q61457 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Ccne1Q61457 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ccne1Q61457 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccne1Q61457 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Ccne1Q61457 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC18.14■□□□□ 0.49
Ccne1Q61457 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC18.14■□□□□ 0.49
Ccne1Q61457 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ccne1Q61457 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ccne1Q61457 Gm45331-201ENSMUST00000209868 554 ntBASIC18.14■□□□□ 0.49
Ccne1Q61457 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccne1Q61457 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccne1Q61457 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Ccne1Q61457 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccne1Q61457 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccne1Q61457 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccne1Q61457 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Ccne1Q61457 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccne1Q61457 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms