Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClpbQ60649 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ClpbQ60649 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClpbQ60649 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClpbQ60649 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClpbQ60649 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClpbQ60649 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClpbQ60649 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.5□□□□□ -0.25
ClpbQ60649 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClpbQ60649 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClpbQ60649 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClpbQ60649 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClpbQ60649 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
ClpbQ60649 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClpbQ60649 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClpbQ60649 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClpbQ60649 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClpbQ60649 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClpbQ60649 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClpbQ60649 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ClpbQ60649 Gm28630-201ENSMUST00000187806 498 ntBASIC13.5□□□□□ -0.25
ClpbQ60649 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ClpbQ60649 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.5□□□□□ -0.25
ClpbQ60649 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClpbQ60649 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClpbQ60649 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClpbQ60649 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClpbQ60649 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.5□□□□□ -0.25
ClpbQ60649 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClpbQ60649 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClpbQ60649 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
ClpbQ60649 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClpbQ60649 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClpbQ60649 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClpbQ60649 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClpbQ60649 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClpbQ60649 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
ClpbQ60649 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClpbQ60649 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClpbQ60649 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.5□□□□□ -0.25
ClpbQ60649 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClpbQ60649 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClpbQ60649 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClpbQ60649 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClpbQ60649 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ClpbQ60649 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
ClpbQ60649 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
ClpbQ60649 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClpbQ60649 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.49□□□□□ -0.25
ClpbQ60649 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.49□□□□□ -0.25
ClpbQ60649 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ClpbQ60649 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClpbQ60649 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClpbQ60649 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ClpbQ60649 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClpbQ60649 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClpbQ60649 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClpbQ60649 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClpbQ60649 Gm5566-201ENSMUST00000116118 459 ntBASIC13.49□□□□□ -0.25
ClpbQ60649 Gm13453-201ENSMUST00000118708 357 ntBASIC13.49□□□□□ -0.25
ClpbQ60649 Gm20949-201ENSMUST00000206478 952 ntBASIC13.49□□□□□ -0.25
ClpbQ60649 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ClpbQ60649 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
ClpbQ60649 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.49□□□□□ -0.25
ClpbQ60649 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClpbQ60649 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClpbQ60649 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.49□□□□□ -0.25
ClpbQ60649 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClpbQ60649 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
ClpbQ60649 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClpbQ60649 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.49□□□□□ -0.25
ClpbQ60649 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ClpbQ60649 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.49□□□□□ -0.25
ClpbQ60649 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.49□□□□□ -0.25
ClpbQ60649 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClpbQ60649 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpbQ60649 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ClpbQ60649 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpbQ60649 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
ClpbQ60649 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpbQ60649 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpbQ60649 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpbQ60649 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ClpbQ60649 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpbQ60649 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpbQ60649 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpbQ60649 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ClpbQ60649 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ClpbQ60649 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpbQ60649 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ClpbQ60649 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ClpbQ60649 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpbQ60649 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
ClpbQ60649 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClpbQ60649 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ClpbQ60649 Gm6222-201ENSMUST00000120787 396 ntBASIC13.48□□□□□ -0.25
ClpbQ60649 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ClpbQ60649 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
ClpbQ60649 Gm29310-201ENSMUST00000185468 696 ntBASIC13.48□□□□□ -0.25
ClpbQ60649 Gm21825-201ENSMUST00000185728 696 ntBASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms