Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Vps13aQ5H8C4 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vps13aQ5H8C4 Gm13813-201ENSMUST00000120998 787 ntBASIC13.63□□□□□ -0.23
Vps13aQ5H8C4 Gm13316-201ENSMUST00000140537 691 ntBASIC13.63□□□□□ -0.23
Vps13aQ5H8C4 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.63□□□□□ -0.23
Vps13aQ5H8C4 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.63□□□□□ -0.23
Vps13aQ5H8C4 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.63□□□□□ -0.23
Vps13aQ5H8C4 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vps13aQ5H8C4 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vps13aQ5H8C4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps13aQ5H8C4 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps13aQ5H8C4 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps13aQ5H8C4 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Vps13aQ5H8C4 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Vps13aQ5H8C4 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps13aQ5H8C4 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps13aQ5H8C4 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps13aQ5H8C4 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.63□□□□□ -0.23
Vps13aQ5H8C4 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Vps13aQ5H8C4 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps13aQ5H8C4 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.62□□□□□ -0.23
Vps13aQ5H8C4 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vps13aQ5H8C4 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vps13aQ5H8C4 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps13aQ5H8C4 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vps13aQ5H8C4 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps13aQ5H8C4 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps13aQ5H8C4 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps13aQ5H8C4 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.62□□□□□ -0.23
Vps13aQ5H8C4 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.62□□□□□ -0.23
Vps13aQ5H8C4 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vps13aQ5H8C4 Gm4607-201ENSMUST00000206649 577 ntBASIC13.62□□□□□ -0.23
Vps13aQ5H8C4 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.62□□□□□ -0.23
Vps13aQ5H8C4 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.62□□□□□ -0.23
Vps13aQ5H8C4 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps13aQ5H8C4 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Vps13aQ5H8C4 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps13aQ5H8C4 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps13aQ5H8C4 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.62□□□□□ -0.23
Vps13aQ5H8C4 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Vps13aQ5H8C4 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Vps13aQ5H8C4 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps13aQ5H8C4 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Vps13aQ5H8C4 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.62□□□□□ -0.23
Vps13aQ5H8C4 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vps13aQ5H8C4 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.62□□□□□ -0.23
Vps13aQ5H8C4 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vps13aQ5H8C4 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps13aQ5H8C4 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vps13aQ5H8C4 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps13aQ5H8C4 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps13aQ5H8C4 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vps13aQ5H8C4 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Vps13aQ5H8C4 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Vps13aQ5H8C4 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 Gm10146-201ENSMUST00000072739 309 ntBASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps13aQ5H8C4 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps13aQ5H8C4 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps13aQ5H8C4 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps13aQ5H8C4 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps13aQ5H8C4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps13aQ5H8C4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps13aQ5H8C4 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms