Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn2bQ56A07 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn2bQ56A07 Gm13365-201ENSMUST00000121188 973 ntBASIC13.9□□□□□ -0.18
Scn2bQ56A07 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.9□□□□□ -0.18
Scn2bQ56A07 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Scn2bQ56A07 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn2bQ56A07 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn2bQ56A07 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Scn2bQ56A07 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.9□□□□□ -0.18
Scn2bQ56A07 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn2bQ56A07 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Scn2bQ56A07 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn2bQ56A07 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Scn2bQ56A07 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn2bQ56A07 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn2bQ56A07 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Scn2bQ56A07 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Scn2bQ56A07 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Scn2bQ56A07 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn2bQ56A07 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Scn2bQ56A07 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Scn2bQ56A07 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Scn2bQ56A07 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn2bQ56A07 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Scn2bQ56A07 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.9□□□□□ -0.19
Scn2bQ56A07 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
Scn2bQ56A07 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn2bQ56A07 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn2bQ56A07 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Scn2bQ56A07 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn2bQ56A07 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn2bQ56A07 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn2bQ56A07 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.89□□□□□ -0.19
Scn2bQ56A07 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn2bQ56A07 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn2bQ56A07 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn2bQ56A07 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn2bQ56A07 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn2bQ56A07 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn2bQ56A07 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Scn2bQ56A07 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Scn2bQ56A07 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Scn2bQ56A07 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Scn2bQ56A07 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.89□□□□□ -0.19
Scn2bQ56A07 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Scn2bQ56A07 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn2bQ56A07 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Scn2bQ56A07 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Scn2bQ56A07 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.89□□□□□ -0.19
Scn2bQ56A07 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Scn2bQ56A07 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn2bQ56A07 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.89□□□□□ -0.19
Scn2bQ56A07 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Scn2bQ56A07 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Scn2bQ56A07 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn2bQ56A07 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.89□□□□□ -0.19
Scn2bQ56A07 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.89□□□□□ -0.19
Scn2bQ56A07 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scn2bQ56A07 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.89□□□□□ -0.19
Scn2bQ56A07 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Scn2bQ56A07 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn2bQ56A07 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scn2bQ56A07 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scn2bQ56A07 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn2bQ56A07 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn2bQ56A07 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scn2bQ56A07 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn2bQ56A07 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn2bQ56A07 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Scn2bQ56A07 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scn2bQ56A07 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scn2bQ56A07 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.88□□□□□ -0.19
Scn2bQ56A07 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.88□□□□□ -0.19
Scn2bQ56A07 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Scn2bQ56A07 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn2bQ56A07 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.88□□□□□ -0.19
Scn2bQ56A07 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.88□□□□□ -0.19
Scn2bQ56A07 Gm18737-201ENSMUST00000173594 937 ntBASIC13.88□□□□□ -0.19
Scn2bQ56A07 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Scn2bQ56A07 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scn2bQ56A07 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn2bQ56A07 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Scn2bQ56A07 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn2bQ56A07 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn2bQ56A07 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scn2bQ56A07 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn2bQ56A07 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn2bQ56A07 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn2bQ56A07 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn2bQ56A07 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scn2bQ56A07 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn2bQ56A07 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Scn2bQ56A07 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn2bQ56A07 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn2bQ56A07 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn2bQ56A07 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.88□□□□□ -0.19
Scn2bQ56A07 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Scn2bQ56A07 Acot6-202ENSMUST00000222921 3622 ntBASIC13.88□□□□□ -0.19
Scn2bQ56A07 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn2bQ56A07 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms