Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rc3h1Q4VGL6 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rc3h1Q4VGL6 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Rc3h1Q4VGL6 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Rc3h1Q4VGL6 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rc3h1Q4VGL6 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rc3h1Q4VGL6 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rc3h1Q4VGL6 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rc3h1Q4VGL6 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC16.21■□□□□ 0.19
Rc3h1Q4VGL6 Gm18905-201ENSMUST00000205454 928 ntBASIC16.21■□□□□ 0.19
Rc3h1Q4VGL6 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rc3h1Q4VGL6 AC130829.1-201ENSMUST00000221548 494 ntBASIC16.21■□□□□ 0.19
Rc3h1Q4VGL6 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC16.21■□□□□ 0.19
Rc3h1Q4VGL6 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rc3h1Q4VGL6 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Rc3h1Q4VGL6 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rc3h1Q4VGL6 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.21■□□□□ 0.19
Rc3h1Q4VGL6 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rc3h1Q4VGL6 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rc3h1Q4VGL6 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Rc3h1Q4VGL6 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rc3h1Q4VGL6 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rc3h1Q4VGL6 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.21■□□□□ 0.18
Rc3h1Q4VGL6 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rc3h1Q4VGL6 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rc3h1Q4VGL6 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rc3h1Q4VGL6 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.2■□□□□ 0.18
Rc3h1Q4VGL6 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rc3h1Q4VGL6 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rc3h1Q4VGL6 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rc3h1Q4VGL6 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rc3h1Q4VGL6 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rc3h1Q4VGL6 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rc3h1Q4VGL6 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rc3h1Q4VGL6 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rc3h1Q4VGL6 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.2■□□□□ 0.18
Rc3h1Q4VGL6 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC16.2■□□□□ 0.18
Rc3h1Q4VGL6 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.2■□□□□ 0.18
Rc3h1Q4VGL6 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.2■□□□□ 0.18
Rc3h1Q4VGL6 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC16.2■□□□□ 0.18
Rc3h1Q4VGL6 Gm5425-201ENSMUST00000214125 459 ntBASIC16.2■□□□□ 0.18
Rc3h1Q4VGL6 AC153937.1-201ENSMUST00000218734 412 ntBASIC16.2■□□□□ 0.18
Rc3h1Q4VGL6 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Rc3h1Q4VGL6 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rc3h1Q4VGL6 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rc3h1Q4VGL6 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC16.2■□□□□ 0.18
Rc3h1Q4VGL6 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rc3h1Q4VGL6 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rc3h1Q4VGL6 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Rc3h1Q4VGL6 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rc3h1Q4VGL6 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.2■□□□□ 0.18
Rc3h1Q4VGL6 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rc3h1Q4VGL6 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rc3h1Q4VGL6 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.2■□□□□ 0.18
Rc3h1Q4VGL6 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rc3h1Q4VGL6 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rc3h1Q4VGL6 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rc3h1Q4VGL6 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC16.19■□□□□ 0.18
Rc3h1Q4VGL6 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rc3h1Q4VGL6 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rc3h1Q4VGL6 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rc3h1Q4VGL6 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rc3h1Q4VGL6 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rc3h1Q4VGL6 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rc3h1Q4VGL6 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rc3h1Q4VGL6 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Rc3h1Q4VGL6 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC16.19■□□□□ 0.18
Rc3h1Q4VGL6 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rc3h1Q4VGL6 Gm7558-201ENSMUST00000193221 1165 ntBASIC16.19■□□□□ 0.18
Rc3h1Q4VGL6 Gm43094-201ENSMUST00000196549 921 ntBASIC16.19■□□□□ 0.18
Rc3h1Q4VGL6 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC16.19■□□□□ 0.18
Rc3h1Q4VGL6 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rc3h1Q4VGL6 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Rc3h1Q4VGL6 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rc3h1Q4VGL6 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rc3h1Q4VGL6 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
Rc3h1Q4VGL6 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rc3h1Q4VGL6 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rc3h1Q4VGL6 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rc3h1Q4VGL6 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rc3h1Q4VGL6 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rc3h1Q4VGL6 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Rc3h1Q4VGL6 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h1Q4VGL6 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Rc3h1Q4VGL6 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h1Q4VGL6 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h1Q4VGL6 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h1Q4VGL6 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h1Q4VGL6 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h1Q4VGL6 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h1Q4VGL6 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h1Q4VGL6 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h1Q4VGL6 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h1Q4VGL6 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h1Q4VGL6 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC16.18■□□□□ 0.18
Rc3h1Q4VGL6 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.18■□□□□ 0.18
Rc3h1Q4VGL6 Mir7654-201ENSMUST00000185082 70 ntBASIC16.18■□□□□ 0.18
Rc3h1Q4VGL6 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
Rc3h1Q4VGL6 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC16.18■□□□□ 0.18
Rc3h1Q4VGL6 AC156560.2-201ENSMUST00000221232 264 ntBASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms