Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim80Q3V061 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trim80Q3V061 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trim80Q3V061 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim80Q3V061 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim80Q3V061 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Trim80Q3V061 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim80Q3V061 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim80Q3V061 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim80Q3V061 Gm18489-201ENSMUST00000172565 551 ntBASIC14.55□□□□□ -0.08
Trim80Q3V061 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trim80Q3V061 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim80Q3V061 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.55□□□□□ -0.08
Trim80Q3V061 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.55□□□□□ -0.08
Trim80Q3V061 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim80Q3V061 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trim80Q3V061 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim80Q3V061 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.55□□□□□ -0.08
Trim80Q3V061 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trim80Q3V061 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trim80Q3V061 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim80Q3V061 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim80Q3V061 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim80Q3V061 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim80Q3V061 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim80Q3V061 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim80Q3V061 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim80Q3V061 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim80Q3V061 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trim80Q3V061 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trim80Q3V061 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim80Q3V061 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim80Q3V061 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trim80Q3V061 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim80Q3V061 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trim80Q3V061 Rubie-203ENSMUST00000227803 2430 ntBASIC14.54□□□□□ -0.08
Trim80Q3V061 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim80Q3V061 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim80Q3V061 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim80Q3V061 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim80Q3V061 Grk6-205ENSMUST00000224653 2976 ntBASIC14.54□□□□□ -0.08
Trim80Q3V061 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim80Q3V061 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim80Q3V061 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim80Q3V061 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.54□□□□□ -0.08
Trim80Q3V061 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Trim80Q3V061 Gm27494-201ENSMUST00000184735 189 ntBASIC14.54□□□□□ -0.08
Trim80Q3V061 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.54□□□□□ -0.08
Trim80Q3V061 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.54□□□□□ -0.08
Trim80Q3V061 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim80Q3V061 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim80Q3V061 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim80Q3V061 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim80Q3V061 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim80Q3V061 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim80Q3V061 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim80Q3V061 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim80Q3V061 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trim80Q3V061 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.54□□□□□ -0.08
Trim80Q3V061 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim80Q3V061 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim80Q3V061 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trim80Q3V061 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim80Q3V061 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim80Q3V061 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim80Q3V061 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim80Q3V061 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim80Q3V061 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim80Q3V061 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim80Q3V061 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim80Q3V061 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim80Q3V061 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim80Q3V061 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim80Q3V061 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trim80Q3V061 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim80Q3V061 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim80Q3V061 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim80Q3V061 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim80Q3V061 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trim80Q3V061 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim80Q3V061 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim80Q3V061 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim80Q3V061 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim80Q3V061 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim80Q3V061 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trim80Q3V061 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim80Q3V061 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim80Q3V061 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim80Q3V061 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.53□□□□□ -0.08
Trim80Q3V061 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.53□□□□□ -0.08
Trim80Q3V061 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.53□□□□□ -0.08
Trim80Q3V061 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim80Q3V061 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trim80Q3V061 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim80Q3V061 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim80Q3V061 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.53□□□□□ -0.08
Trim80Q3V061 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Trim80Q3V061 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim80Q3V061 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim80Q3V061 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms