Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Ccdc27Q3V036 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc27Q3V036 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc27Q3V036 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc27Q3V036 Gm12260-201ENSMUST00000122447 411 ntBASIC17.93■□□□□ 0.46
Ccdc27Q3V036 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Ccdc27Q3V036 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Ccdc27Q3V036 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Ccdc27Q3V036 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ccdc27Q3V036 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.93■□□□□ 0.46
Ccdc27Q3V036 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.93■□□□□ 0.46
Ccdc27Q3V036 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc27Q3V036 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc27Q3V036 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc27Q3V036 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc27Q3V036 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc27Q3V036 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.93■□□□□ 0.46
Ccdc27Q3V036 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc27Q3V036 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc27Q3V036 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc27Q3V036 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc27Q3V036 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc27Q3V036 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.92■□□□□ 0.46
Ccdc27Q3V036 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc27Q3V036 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc27Q3V036 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc27Q3V036 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ccdc27Q3V036 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc27Q3V036 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
Ccdc27Q3V036 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc27Q3V036 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc27Q3V036 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc27Q3V036 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc27Q3V036 Gm37861-201ENSMUST00000193534 2869 ntBASIC17.92■□□□□ 0.46
Ccdc27Q3V036 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Ccdc27Q3V036 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.92■□□□□ 0.46
Ccdc27Q3V036 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc27Q3V036 Gm18041-201ENSMUST00000218210 618 ntBASIC17.92■□□□□ 0.46
Ccdc27Q3V036 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc27Q3V036 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc27Q3V036 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc27Q3V036 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc27Q3V036 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc27Q3V036 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc27Q3V036 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc27Q3V036 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Ccdc27Q3V036 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc27Q3V036 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ccdc27Q3V036 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc27Q3V036 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ccdc27Q3V036 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ccdc27Q3V036 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC17.91■□□□□ 0.46
Ccdc27Q3V036 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ccdc27Q3V036 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc27Q3V036 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc27Q3V036 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc27Q3V036 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc27Q3V036 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc27Q3V036 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc27Q3V036 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc27Q3V036 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ccdc27Q3V036 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc27Q3V036 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Ccdc27Q3V036 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.91■□□□□ 0.46
Ccdc27Q3V036 Gm14042-201ENSMUST00000120139 833 ntBASIC17.91■□□□□ 0.46
Ccdc27Q3V036 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc27Q3V036 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
Ccdc27Q3V036 Rpph1-201ENSMUST00000175096 319 ntBASIC17.91■□□□□ 0.46
Ccdc27Q3V036 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.91■□□□□ 0.46
Ccdc27Q3V036 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc27Q3V036 Gm45098-201ENSMUST00000207179 657 ntBASIC17.91■□□□□ 0.46
Ccdc27Q3V036 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc27Q3V036 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.91■□□□□ 0.46
Ccdc27Q3V036 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.91■□□□□ 0.46
Ccdc27Q3V036 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc27Q3V036 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ccdc27Q3V036 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc27Q3V036 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc27Q3V036 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc27Q3V036 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc27Q3V036 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc27Q3V036 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc27Q3V036 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc27Q3V036 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ccdc27Q3V036 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc27Q3V036 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc27Q3V036 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc27Q3V036 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc27Q3V036 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc27Q3V036 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc27Q3V036 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc27Q3V036 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc27Q3V036 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc27Q3V036 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc27Q3V036 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.9■□□□□ 0.46
Ccdc27Q3V036 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.9■□□□□ 0.46
Ccdc27Q3V036 Gm15483-201ENSMUST00000120338 456 ntBASIC17.9■□□□□ 0.46
Ccdc27Q3V036 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.9■□□□□ 0.46
Ccdc27Q3V036 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc27Q3V036 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms