Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Nlrc4Q3UP24 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Nlrc4Q3UP24 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nlrc4Q3UP24 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nlrc4Q3UP24 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nlrc4Q3UP24 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nlrc4Q3UP24 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nlrc4Q3UP24 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nlrc4Q3UP24 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Nlrc4Q3UP24 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nlrc4Q3UP24 Gm15321-201ENSMUST00000121290 288 ntBASIC14.8□□□□□ -0.04
Nlrc4Q3UP24 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.8□□□□□ -0.04
Nlrc4Q3UP24 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nlrc4Q3UP24 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nlrc4Q3UP24 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.8□□□□□ -0.04
Nlrc4Q3UP24 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nlrc4Q3UP24 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nlrc4Q3UP24 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nlrc4Q3UP24 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Nlrc4Q3UP24 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nlrc4Q3UP24 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.8□□□□□ -0.04
Nlrc4Q3UP24 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nlrc4Q3UP24 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nlrc4Q3UP24 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nlrc4Q3UP24 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.8□□□□□ -0.04
Nlrc4Q3UP24 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nlrc4Q3UP24 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nlrc4Q3UP24 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Nlrc4Q3UP24 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nlrc4Q3UP24 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Nlrc4Q3UP24 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nlrc4Q3UP24 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nlrc4Q3UP24 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nlrc4Q3UP24 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nlrc4Q3UP24 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nlrc4Q3UP24 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nlrc4Q3UP24 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nlrc4Q3UP24 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.79□□□□□ -0.04
Nlrc4Q3UP24 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.79□□□□□ -0.04
Nlrc4Q3UP24 Gm9522-201ENSMUST00000182394 926 ntBASIC14.79□□□□□ -0.04
Nlrc4Q3UP24 Gm10766-202ENSMUST00000194123 606 ntBASIC14.79□□□□□ -0.04
Nlrc4Q3UP24 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nlrc4Q3UP24 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nlrc4Q3UP24 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.79□□□□□ -0.04
Nlrc4Q3UP24 Syt7-204ENSMUST00000223586 1344 ntBASIC14.79□□□□□ -0.04
Nlrc4Q3UP24 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.79□□□□□ -0.04
Nlrc4Q3UP24 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.79□□□□□ -0.04
Nlrc4Q3UP24 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.79□□□□□ -0.04
Nlrc4Q3UP24 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.79□□□□□ -0.04
Nlrc4Q3UP24 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Nlrc4Q3UP24 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nlrc4Q3UP24 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Nlrc4Q3UP24 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nlrc4Q3UP24 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nlrc4Q3UP24 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nlrc4Q3UP24 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nlrc4Q3UP24 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Nlrc4Q3UP24 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nlrc4Q3UP24 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nlrc4Q3UP24 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nlrc4Q3UP24 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nlrc4Q3UP24 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nlrc4Q3UP24 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nlrc4Q3UP24 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.78□□□□□ -0.04
Nlrc4Q3UP24 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Nlrc4Q3UP24 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nlrc4Q3UP24 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nlrc4Q3UP24 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nlrc4Q3UP24 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Nlrc4Q3UP24 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nlrc4Q3UP24 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.78□□□□□ -0.04
Nlrc4Q3UP24 Gm24694-201ENSMUST00000180054 110 ntBASIC14.78□□□□□ -0.04
Nlrc4Q3UP24 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.78□□□□□ -0.04
Nlrc4Q3UP24 Gm27663-201ENSMUST00000184839 110 ntBASIC14.78□□□□□ -0.04
Nlrc4Q3UP24 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nlrc4Q3UP24 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nlrc4Q3UP24 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nlrc4Q3UP24 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nlrc4Q3UP24 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nlrc4Q3UP24 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nlrc4Q3UP24 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Nlrc4Q3UP24 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nlrc4Q3UP24 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Nlrc4Q3UP24 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nlrc4Q3UP24 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.78□□□□□ -0.04
Nlrc4Q3UP24 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nlrc4Q3UP24 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Nlrc4Q3UP24 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nlrc4Q3UP24 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Nlrc4Q3UP24 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nlrc4Q3UP24 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nlrc4Q3UP24 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nlrc4Q3UP24 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Nlrc4Q3UP24 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Nlrc4Q3UP24 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nlrc4Q3UP24 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Nlrc4Q3UP24 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.77□□□□□ -0.04
Nlrc4Q3UP24 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Nlrc4Q3UP24 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nlrc4Q3UP24 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms