Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Gm20392-201ENSMUST00000173047 701 ntBASIC12.81□□□□□ -0.36
Spg11Q3UHA3 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.81□□□□□ -0.36
Spg11Q3UHA3 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Gm42900-201ENSMUST00000197184 2167 ntBASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.81□□□□□ -0.36
Spg11Q3UHA3 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Spg11Q3UHA3 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Spg11Q3UHA3 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Spg11Q3UHA3 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.8□□□□□ -0.36
Spg11Q3UHA3 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.8□□□□□ -0.36
Spg11Q3UHA3 Gm42550-201ENSMUST00000201553 960 ntBASIC12.8□□□□□ -0.36
Spg11Q3UHA3 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.8□□□□□ -0.36
Spg11Q3UHA3 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Spg11Q3UHA3 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Spg11Q3UHA3 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.8□□□□□ -0.36
Spg11Q3UHA3 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC12.8□□□□□ -0.36
Spg11Q3UHA3 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Spg11Q3UHA3 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Spg11Q3UHA3 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Spg11Q3UHA3 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Spg11Q3UHA3 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Spg11Q3UHA3 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Spg11Q3UHA3 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Spg11Q3UHA3 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.8□□□□□ -0.36
Spg11Q3UHA3 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.8□□□□□ -0.36
Spg11Q3UHA3 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.8□□□□□ -0.36
Spg11Q3UHA3 Gm7809-201ENSMUST00000153199 742 ntBASIC12.8□□□□□ -0.36
Spg11Q3UHA3 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.8□□□□□ -0.36
Spg11Q3UHA3 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Spg11Q3UHA3 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Spg11Q3UHA3 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Spg11Q3UHA3 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Spg11Q3UHA3 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Spg11Q3UHA3 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Spg11Q3UHA3 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
Spg11Q3UHA3 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Gm11340-201ENSMUST00000119226 412 ntBASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Gm12882-201ENSMUST00000121696 517 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms