Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Brf2Q3UAW9 BC001981-202ENSMUST00000191393 1545 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm22065-201ENSMUST00000103753 110 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm22066-201ENSMUST00000103761 110 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm24932-201ENSMUST00000103763 110 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm24115-201ENSMUST00000103799 110 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm22190-201ENSMUST00000103827 110 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm22191-201ENSMUST00000103831 110 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm24721-201ENSMUST00000103849 110 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm28018-201ENSMUST00000103869 110 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm26399-201ENSMUST00000103937 110 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm25349-201ENSMUST00000177728 110 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm23616-201ENSMUST00000177797 110 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm25871-201ENSMUST00000177816 110 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm24752-201ENSMUST00000178240 110 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm24496-201ENSMUST00000178287 110 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm25649-201ENSMUST00000178476 110 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm25548-201ENSMUST00000178681 110 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm23147-201ENSMUST00000178841 110 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm26095-201ENSMUST00000179270 110 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm22171-201ENSMUST00000179283 110 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm23936-201ENSMUST00000179354 110 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm22619-201ENSMUST00000179516 110 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm25255-201ENSMUST00000179579 110 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm24755-201ENSMUST00000179691 110 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm26506-201ENSMUST00000179692 110 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm25086-201ENSMUST00000179931 110 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm23243-201ENSMUST00000180047 110 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm24659-201ENSMUST00000180212 110 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm24169-201ENSMUST00000180244 110 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm23689-201ENSMUST00000180354 110 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm27359-201ENSMUST00000184153 110 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm27785-201ENSMUST00000184268 110 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm27466-201ENSMUST00000184396 110 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm27703-201ENSMUST00000184836 110 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Brf2Q3UAW9 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Brf2Q3UAW9 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brf2Q3UAW9 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brf2Q3UAW9 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brf2Q3UAW9 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brf2Q3UAW9 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.24□□□□□ -0.29
Brf2Q3UAW9 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brf2Q3UAW9 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brf2Q3UAW9 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brf2Q3UAW9 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Brf2Q3UAW9 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Brf2Q3UAW9 Gm9719-201ENSMUST00000162765 543 ntBASIC13.24□□□□□ -0.29
Brf2Q3UAW9 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.24□□□□□ -0.29
Brf2Q3UAW9 Gm27631-201ENSMUST00000184163 466 ntBASIC13.24□□□□□ -0.29
Brf2Q3UAW9 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.24□□□□□ -0.29
Brf2Q3UAW9 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.24□□□□□ -0.29
Brf2Q3UAW9 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.24□□□□□ -0.29
Brf2Q3UAW9 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brf2Q3UAW9 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Brf2Q3UAW9 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Brf2Q3UAW9 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brf2Q3UAW9 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brf2Q3UAW9 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Brf2Q3UAW9 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Brf2Q3UAW9 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Brf2Q3UAW9 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Brf2Q3UAW9 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brf2Q3UAW9 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brf2Q3UAW9 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Brf2Q3UAW9 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brf2Q3UAW9 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brf2Q3UAW9 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brf2Q3UAW9 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms