Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Gm12070-201ENSMUST00000119551 1002 ntBASIC16.44■□□□□ 0.22
Col5a2Q3U962 Gm12671-201ENSMUST00000119978 1002 ntBASIC16.44■□□□□ 0.22
Col5a2Q3U962 Gm13292-201ENSMUST00000120014 1000 ntBASIC16.44■□□□□ 0.22
Col5a2Q3U962 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC16.44■□□□□ 0.22
Col5a2Q3U962 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col5a2Q3U962 Gm10359-201ENSMUST00000180167 1002 ntBASIC16.44■□□□□ 0.22
Col5a2Q3U962 Gm12033-201ENSMUST00000180654 1002 ntBASIC16.44■□□□□ 0.22
Col5a2Q3U962 Gm5559-201ENSMUST00000180755 1002 ntBASIC16.44■□□□□ 0.22
Col5a2Q3U962 Gm29741-201ENSMUST00000192667 421 ntBASIC16.44■□□□□ 0.22
Col5a2Q3U962 Gm5363-201ENSMUST00000211927 938 ntBASIC16.44■□□□□ 0.22
Col5a2Q3U962 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC16.44■□□□□ 0.22
Col5a2Q3U962 Gm7293-201ENSMUST00000216682 1007 ntBASIC16.44■□□□□ 0.22
Col5a2Q3U962 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col5a2Q3U962 Nsd1-205ENSMUST00000224693 852 ntBASIC16.44■□□□□ 0.22
Col5a2Q3U962 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col5a2Q3U962 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col5a2Q3U962 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC16.44■□□□□ 0.22
Col5a2Q3U962 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col5a2Q3U962 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col5a2Q3U962 Gm3756-201ENSMUST00000169182 1355 ntBASIC16.44■□□□□ 0.22
Col5a2Q3U962 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
Col5a2Q3U962 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col5a2Q3U962 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col5a2Q3U962 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col5a2Q3U962 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col5a2Q3U962 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col5a2Q3U962 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col5a2Q3U962 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col5a2Q3U962 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col5a2Q3U962 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Col5a2Q3U962 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col5a2Q3U962 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col5a2Q3U962 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col5a2Q3U962 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.44■□□□□ 0.22
Col5a2Q3U962 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col5a2Q3U962 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Col5a2Q3U962 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col5a2Q3U962 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col5a2Q3U962 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col5a2Q3U962 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC16.43■□□□□ 0.22
Col5a2Q3U962 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Col5a2Q3U962 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col5a2Q3U962 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC16.43■□□□□ 0.22
Col5a2Q3U962 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC16.43■□□□□ 0.22
Col5a2Q3U962 CT030704.2-201ENSMUST00000228887 494 ntBASIC16.43■□□□□ 0.22
Col5a2Q3U962 Gm10146-201ENSMUST00000072739 309 ntBASIC16.43■□□□□ 0.22
Col5a2Q3U962 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Col5a2Q3U962 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col5a2Q3U962 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col5a2Q3U962 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC16.43■□□□□ 0.22
Col5a2Q3U962 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col5a2Q3U962 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
Col5a2Q3U962 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col5a2Q3U962 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col5a2Q3U962 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Col5a2Q3U962 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC16.43■□□□□ 0.22
Col5a2Q3U962 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC16.43■□□□□ 0.22
Col5a2Q3U962 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Col5a2Q3U962 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col5a2Q3U962 Gm14381-201ENSMUST00000122105 414 ntBASIC16.42■□□□□ 0.22
Col5a2Q3U962 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col5a2Q3U962 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Col5a2Q3U962 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC16.42■□□□□ 0.22
Col5a2Q3U962 Rps4l-202ENSMUST00000204242 789 ntBASIC16.42■□□□□ 0.22
Col5a2Q3U962 Gm17330-201ENSMUST00000221047 165 ntBASIC16.42■□□□□ 0.22
Col5a2Q3U962 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col5a2Q3U962 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col5a2Q3U962 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col5a2Q3U962 Gm45684-201ENSMUST00000210244 1571 ntBASIC16.42■□□□□ 0.22
Col5a2Q3U962 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col5a2Q3U962 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Col5a2Q3U962 AC153366.2-201ENSMUST00000219461 1984 ntBASIC16.42■□□□□ 0.22
Col5a2Q3U962 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Col5a2Q3U962 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col5a2Q3U962 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col5a2Q3U962 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col5a2Q3U962 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col5a2Q3U962 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col5a2Q3U962 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC16.42■□□□□ 0.22
Col5a2Q3U962 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col5a2Q3U962 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col5a2Q3U962 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col5a2Q3U962 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col5a2Q3U962 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col5a2Q3U962 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col5a2Q3U962 Gm11591-201ENSMUST00000120063 702 ntBASIC16.42■□□□□ 0.22
Col5a2Q3U962 Gm12403-201ENSMUST00000121384 959 ntBASIC16.42■□□□□ 0.22
Col5a2Q3U962 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC16.42■□□□□ 0.22
Col5a2Q3U962 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC16.42■□□□□ 0.22
Col5a2Q3U962 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col5a2Q3U962 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC16.42■□□□□ 0.22
Col5a2Q3U962 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC16.42■□□□□ 0.22
Col5a2Q3U962 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC16.42■□□□□ 0.22
Col5a2Q3U962 Gm20482-202ENSMUST00000174729 825 ntBASIC16.42■□□□□ 0.22
Col5a2Q3U962 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col5a2Q3U962 Gm4335-201ENSMUST00000182581 1004 ntBASIC16.42■□□□□ 0.22
Col5a2Q3U962 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Col5a2Q3U962 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Col5a2Q3U962 Gm6082-201ENSMUST00000215204 454 ntBASIC16.42■□□□□ 0.22
Col5a2Q3U962 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms